CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36402	Soybean	nucleus	91.69	90.2
Os06t0118150-00	Rice	nucleus	19.6	59.0
HORVU7Hr1G051740.1	Barley	nucleus	31.23	56.97
KRH48761	Soybean	nucleus	42.86	41.61
KRH66578	Soybean	nucleus	42.52	41.16
Zm00001d031515_P001	Maize	nucleus	38.87	39.8
TraesCS2B01G434400.1	Wheat	nucleus	42.52	38.67
TraesCS2D01G412500.1	Wheat	nucleus	41.86	37.95
TraesCS2A01G415400.1	Wheat	nucleus	41.86	37.95
EES15365	Sorghum	nucleus	38.21	37.22
Zm00001d026186_P001	Maize	nucleus	41.2	35.84
Zm00001d002750_P001	Maize	nucleus	40.86	35.76
EES11224	Sorghum	nucleus	42.19	33.6
TraesCS7A01G251700.1	Wheat	nucleus	39.53	33.33
TraesCS7B01G139400.1	Wheat	nucleus	38.54	32.68
GSMUA_Achr1P01660_001	Banana	nucleus	34.22	31.99
KRH14648	Soybean	extracellular, golgi	22.59	20.0
KRH46196	Soybean	nucleus	20.27	16.62
KRH56248	Soybean	nucleus	28.24	16.54
KRH46194	Soybean	nucleus	24.92	16.41
KRH46191	Soybean	nucleus	24.58	16.05
KRH62709	Soybean	nucleus	26.91	15.88
KRH26778	Soybean	nucleus	24.92	15.72
KRH22574	Soybean	nucleus	24.25	15.24
KRH20589	Soybean	nucleus	26.91	15.2
KRH13249	Soybean	nucleus	26.58	15.01
KRG89766	Soybean	nucleus	25.91	14.97
KRH18640	Soybean	nucleus	25.91	14.61
KRG98748	Soybean	nucleus	24.92	14.18

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:102663224	MapMan:15.5.2.1	EMBL:ACUP02007813	EnsemblPlantsGene:GLYMA_12G241400	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7LWP5	EnsemblPlants:KRH27535	ProteinID:KRH27535
ProteinID:KRH27535.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF488
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002957AE1	:	:

Description

hypothetical protein

Coordinates

chr12:-:39978825..39980885

Molecular Weight (calculated)

34514.9 Da

IEP (calculated)

5.766

GRAVY (calculated)

-0.663

Length

301 amino acids

Sequence
(BLAST)

001: MERELLEIKK GPWSSDEDEV LLRHVSKYGP REWSSIRSKG LLSRTGKSCR LRWVNKLRPN LKTGCKFTAE EERLVVELQA QFGNKWAKIA TYLQGRTDND
101: VKNFWSSRRK RLERMLQKPP TSKPHKNNGK THINQVEEMV PPCSSNQVEE ILSYSTSYMG NTQVFEMINL PDLIKPNYQQ LENDYLSAVE VEATPLHTVP
201: SFESSLGYNF PLLPEPDPLM DCPLFPECQD LVPEPFDPIF VDGFKEKKCS ECVCSSQKLG TRLPTFGLEG NSQSASSNGF FKDFPSEIFE YFEHIPTSSD
301: Q

Best Arabidopsis Sequence Match ( AT3G60460.1 )
(BLAST)

001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP

Arabidopsis Description

DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.