CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46191	Soybean	nucleus	77.38	61.61
KRG98748	Soybean	nucleus	86.38	59.92
KRH46194	Soybean	nucleus	74.11	59.52
HORVU7Hr1G105450.1	Barley	nucleus	25.34	28.01
Zm00001d033075_P001	Maize	nucleus	28.07	27.69
KRH14648	Soybean	extracellular, golgi	23.43	25.29
TraesCS7D01G446700.1	Wheat	nucleus	26.43	24.25
TraesCS7B01G357900.1	Wheat	nucleus	26.43	24.25
HORVU7Hr1G105520.2	Barley	nucleus	25.34	23.85
HORVU7Hr1G027370.1	Barley	nucleus	27.25	23.42
KRH20589	Soybean	nucleus	33.79	23.26
TraesCS7B01G031000.1	Wheat	nucleus	26.7	23.22
Zm00001d014364_P002	Maize	nucleus	25.34	23.13
EER90224	Sorghum	nucleus	26.98	23.13
KRH13249	Soybean	nucleus	33.52	23.08
TraesCS4A01G467100.1	Wheat	nucleus	17.71	22.97
TraesCS7D01G130100.1	Wheat	nucleus	26.43	22.77
KRH26778	Soybean	nucleus	29.43	22.64
VIT_19s0090g00590.t01	Wine grape	nucleus	28.61	22.63
KRH22574	Soybean	nucleus	29.43	22.55
KRH56248	Soybean	nucleus	31.34	22.37
KRH62709	Soybean	nucleus	31.06	22.35
KXG38121	Sorghum	nucleus	27.79	22.32
Zm00001d013801_P001	Maize	nucleus	27.79	22.22
HORVU6Hr1G026450.1	Barley	nucleus	23.71	21.75
TraesCS6D01G126900.1	Wheat	nucleus	23.43	21.55
KRG89766	Soybean	nucleus	30.25	21.31
KRH48761	Soybean	nucleus	17.98	21.29
Os06t0679400-01	Rice	nucleus	25.61	21.03
KRH18640	Soybean	nucleus	30.25	20.79
KRH27535	Soybean	nucleus	16.62	20.27
KRH66578	Soybean	nucleus	17.17	20.26
Os03t0578900-00	Rice	nucleus	28.61	19.89
KRH36402	Soybean	nucleus	16.08	19.28
Zm00001d036577_P001	Maize	nucleus	25.07	18.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EMBL:ACUP02005328	EnsemblPlantsGene:GLYMA_08G317800	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:IPR017930	UniProt:K7LA52	EnsemblPlants:KRH46196	ProteinID:KRH46196
ProteinID:KRH46196.1	InterPro:Myb-like_dom	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS50090	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF938	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000295CD94
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:43720802..43727921

Molecular Weight (calculated)

41621.3 Da

IEP (calculated)

9.287

GRAVY (calculated)

-0.879

Length

367 amino acids

Sequence
(BLAST)

001: MLSSWIMWQN GEGNWNAVQR NTGLNRCGKS CRLRWANHLR PNLKKGAFSP EEEKLIVDLH AQFGNKWARM AALLPGRTNN EIKNYWNTGI KRRQRQGLPL
101: YSDEHDQHNR STTPTPPTTP FPCLTPTGSN PDIATSFELF NQNQQQHHQQ QQQYQYQQQQ QYQQHPLSPT ASHHSPLSSP LQHRQPFTSS SPHNFLDHSP
201: LPLSSSYSPS PLSFTFQRPA PMLSTPLRFK RYCASPSYNN NNNNNNLSDP PLTTQFPHLD GFRFPVSSGF SQFFQPSLLD SDRGVSSSSS SLAFQPKLEL
301: PLSQYYKPSQ EQDIKLDIEF NDPSFQSSSS GLMGDLLFEA QAMASGKNSK KRGYLSLNEG NNVFNAC

Best Arabidopsis Sequence Match ( AT2G32460.1 )
(BLAST)

001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC

Arabidopsis Description

MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.