CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13249	Soybean	nucleus	90.99	90.99
KRH62709	Soybean	nucleus	61.16	63.92
KRH56248	Soybean	nucleus	60.98	63.23
GSMUA_Achr7P21550_001	Banana	nucleus	14.63	59.09
CDY69320	Canola	nucleus	22.14	58.13
CDY72198	Canola	nucleus	21.95	57.64
VIT_13s0067g01630.t01	Wine grape	nucleus	60.04	57.25
GSMUA_Achr10P...	Banana	nucleus	35.46	48.96
AT5G06100.4	Thale cress	nucleus	42.4	43.46
CDY08526	Canola	nucleus	38.84	41.24
KRH18640	Soybean	nucleus	41.28	41.2
CDY56849	Canola	nucleus	38.46	40.76
KRG89766	Soybean	nucleus	39.77	40.69
Bra002042.1-P	Field mustard	nucleus	35.83	40.64
GSMUA_Achr1P17150_001	Banana	nucleus	44.47	40.44
Bra034842.1-P	Field mustard	nucleus	39.02	40.23
AT3G11440.1	Thale cress	nucleus	41.28	39.78
CDY66041	Canola	nucleus	35.83	39.71
GSMUA_AchrUn_...	Banana	nucleus	42.21	39.34
Zm00001d033075_P001	Maize	nucleus	25.52	36.56
KRH46196	Soybean	nucleus	23.26	33.79
HORVU7Hr1G105450.1	Barley	nucleus	21.01	33.73
KRH26778	Soybean	nucleus	29.64	33.12
HORVU7Hr1G027370.1	Barley	nucleus	26.45	33.02
KXG38121	Sorghum	nucleus	27.58	32.17
TraesCS7D01G130100.1	Wheat	nucleus	25.7	32.16
KRH14648	Soybean	extracellular, golgi	20.45	32.06
TraesCS7B01G031000.1	Wheat	nucleus	25.33	31.99
KRH46194	Soybean	nucleus	27.39	31.95
KRH22574	Soybean	nucleus	28.71	31.94
TraesCS4A01G467100.1	Wheat	nucleus	16.89	31.8
KRH46191	Soybean	nucleus	27.2	31.45
Zm00001d013801_P001	Maize	nucleus	27.02	31.37
HORVU7Hr1G105520.2	Barley	nucleus	22.51	30.77
HORVU6Hr1G026450.1	Barley	nucleus	22.7	30.25
KRG98748	Soybean	nucleus	30.02	30.25
GSMUA_Achr7P21560_001	Banana	nucleus	24.58	30.05
TraesCS7B01G357900.1	Wheat	nucleus	22.33	29.75
TraesCS7D01G446700.1	Wheat	nucleus	22.33	29.75
Zm00001d014364_P002	Maize	nucleus	22.33	29.6
TraesCS6D01G126900.1	Wheat	nucleus	22.14	29.57
EER90224	Sorghum	nucleus	23.64	29.44
GSMUA_Achr7P02510_001	Banana	nucleus	30.77	29.23
KRH48761	Soybean	nucleus	16.89	29.03
KRH66578	Soybean	nucleus	16.32	27.97
Os06t0679400-01	Rice	nucleus	23.08	27.52
KRH27535	Soybean	nucleus	15.2	26.91
KRH36402	Soybean	nucleus	15.2	26.47
Os03t0578900-00	Rice	nucleus	24.39	24.62
Zm00001d036577_P001	Maize	nucleus	21.58	22.5

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100810415	MapMan:15.5.2.1	UniProt:A0A0R0GQI4	EMBL:ACUP02008281	EnsemblPlantsGene:GLYMA_13G187500
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	EnsemblPlants:KRH20589	ProteinID:KRH20589
ProteinID:KRH20589.1	ProteinID:KRH20590.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF938	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0006ED5344	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:30128663..30133972

Molecular Weight (calculated)

58876.8 Da

IEP (calculated)

5.456

GRAVY (calculated)

-0.609

Length

533 amino acids

Sequence
(BLAST)

001: MKKDIEDEVL PNDMSGAQLN DESYEGSAGI VLKKGPWTST EDDILVDYVK KHGEGNWNAV QKHTGLFRCG KSCRLRWANH LRPNLKKGAF AAEEERLIAE
101: LHAKMGNKWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEVSLH ALQESQHSQS TGGLNGGDKM HPDFLQKNSY EIHDAIFDSL KDNQGILPYV
201: HELSDISVYG NKLKGLDSSQ YCSFVPPTSP KRKRLKESTI PFIDSCAMKK KDLYPFDQIQ DNNSDKIAQS FGMQAPLDPG LSSHSSMCYS HSLSNGNSST
301: SKPYEAMKLE LPSLQYPELD LGSWGSSPPP SLLESVDDFL QSPTAISTLE SDCSSPQNSG LLDALLYQAK TMSSSKNHCS DKSSNSSTAT PGDRADSSIL
401: NVYETEWEDY ADPVSPFGAT SILNECPALR ANANSLNGQL PVQTFTGNLP KLESVDQVWT PNNENLTLSL LNITRPDFLL ASDWYDLGSG HCKNQTITTD
501: AATAFLGDDL ATDLKHMTAG ISKTMFENPF QPL

Best Arabidopsis Sequence Match ( AT5G06100.4 )
(BLAST)

001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP

Arabidopsis Description

MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.