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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • peroxisome 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014364_P002 Maize nucleus 75.47 80.35
HORVU7Hr1G105520.2 Barley nucleus 57.24 62.82
HORVU7Hr1G105450.1 Barley nucleus 48.13 62.05
Os06t0679400-01 Rice nucleus 64.02 61.3
TraesCS7D01G446700.1 Wheat nucleus 57.01 61.0
TraesCS7B01G357900.1 Wheat nucleus 56.54 60.5
TraesCS7A01G458700.1 Wheat nucleus 56.54 59.9
Zm00001d036577_P001 Maize nucleus 62.85 52.64
CDY69320 Canola nucleus 21.5 45.32
CDY72198 Canola nucleus 21.26 44.83
AT4G26930.1 Thale cress nucleus 28.97 31.88
GSMUA_Achr4P23690_001 Banana nucleus 27.34 31.79
GSMUA_Achr7P00280_001 Banana nucleus 24.07 31.6
GSMUA_Achr2P13930_001 Banana nucleus 22.2 28.88
Bra021791.1-P Field mustard nucleus 25.93 28.61
KRH14648 Soybean extracellular, golgi 22.66 28.53
CDY20794 Canola nucleus 26.4 27.49
GSMUA_Achr4P27730_001 Banana nucleus 22.66 27.32
CDY38535 Canola nucleus 27.57 27.31
CDY19890 Canola nucleus 27.34 27.27
CDY67258 Canola nucleus 27.34 27.21
KRH46196 Soybean nucleus 23.13 26.98
KRH46194 Soybean nucleus 28.74 26.91
PGSC0003DMT400036086 Potato nucleus 29.91 26.89
Bra000531.1-P Field mustard nucleus 27.1 26.67
CDX83247 Canola nucleus 27.1 26.67
KRH46191 Soybean nucleus 28.5 26.46
CDY19141 Canola nucleus 27.34 26.35
CDY15321 Canola nucleus 27.57 26.34
KXG38121 Sorghum nucleus 28.04 26.26
CDY66700 Canola nucleus 27.1 26.13
PGSC0003DMT400058426 Potato nucleus 31.54 25.81
Solyc06g073640.2.1 Tomato nucleus 30.37 25.79
PGSC0003DMT400015156 Potato nucleus 30.14 25.7
Bra002042.1-P Field mustard nucleus 28.04 25.53
CDY68663 Canola nucleus 26.87 25.16
KRG98748 Soybean nucleus 31.07 25.14
Bra022888.1-P Field mustard nucleus 26.64 24.95
CDY66041 Canola nucleus 27.8 24.74
VIT_06s0009g02480.t01 Wine grape nucleus 30.14 24.62
AT2G26960.1 Thale cress nucleus 24.53 24.59
Solyc01g009070.2.1 Tomato nucleus 30.84 24.58
AT2G32460.1 Thale cress nucleus 28.04 24.49
VIT_12s0059g00700.t01 Wine grape nucleus 24.3 24.41
KRH62709 Soybean nucleus 28.97 24.31
EES15365 Sorghum nucleus 17.52 24.27
PGSC0003DMT400074486 Potato nucleus 27.34 24.17
Solyc07g052300.2.1 Tomato nucleus 27.34 24.07
Bra005597.1-P Field mustard nucleus 26.87 24.01
CDY48264 Canola nucleus 26.87 24.01
KRH56248 Soybean nucleus 28.74 23.93
CDY12203 Canola nucleus 26.87 23.91
CDY08526 Canola nucleus 28.04 23.9
KRH26778 Soybean nucleus 26.64 23.9
AT2G26950.1 Thale cress cytosol 21.26 23.82
KRG89766 Soybean nucleus 28.97 23.8
CDY56849 Canola nucleus 27.8 23.66
KRH20589 Soybean nucleus 29.44 23.64
KRH13249 Soybean nucleus 29.44 23.64
KRH22574 Soybean nucleus 26.4 23.59
Bra028997.1-P Field mustard nucleus 30.14 23.33
CDY43016 Canola nucleus 30.14 23.29
VIT_19s0090g00590.t01 Wine grape nucleus 25.23 23.28
KRH18640 Soybean nucleus 28.97 23.22
Bra034842.1-P Field mustard nucleus 28.04 23.21
CDY61426 Canola nucleus 30.14 23.16
Bra035547.1-P Field mustard nucleus 29.21 23.06
Bra002938.1-P Field mustard nucleus 30.84 22.96
VIT_13s0067g01630.t01 Wine grape nucleus 29.91 22.9
KXG33583 Sorghum nucleus 29.67 22.84
AT5G06100.4 Thale cress nucleus 27.57 22.69
AT5G55020.1 Thale cress nucleus 27.57 22.56
AT3G11440.1 Thale cress nucleus 28.5 22.06
KXG20323 Sorghum nucleus 24.3 22.03
EES11224 Sorghum nucleus 19.39 21.96
Solyc12g005890.1.1 Tomato nucleus 20.56 21.73
PGSC0003DMT400070549 Potato nucleus 24.3 21.44
CDX71481 Canola nucleus 27.8 20.88
Solyc11g072060.1.1 Tomato nucleus 24.07 19.07
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1EntrezGene:8083214UniProt:C5Z7V2EnsemblPlants:EER90224ProteinID:EER90224
ProteinID:EER90224.1GO:GO:0000981GO:GO:0001135GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006357GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0030154GO:GO:0043565GO:GO:0044212InterPro:Homeobox-like_sfInterPro:IPR017930
InterPro:Myb_domPFAM:PF00249InterPro:PG/BPGM_mutase_ASScanProsite:PS00175PFscan:PS51294PANTHER:PTHR10641
PANTHER:PTHR10641:SF616InterPro:SANT/MybSMART:SM00717EnsemblPlantsGene:SORBI_3010G230200SUPFAM:SSF46689unigene:Sbi.20935
UniParc:UPI0001A89662RefSeq:XP_002438857.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr10:-:57289305..57291533
Molecular Weight (calculated)
45766.8 Da
IEP (calculated)
7.185
GRAVY (calculated)
-0.510
Length
428 amino acids
Sequence
(BLAST)
001: MARSGGGGSV GVEGGGGGGT GGGGLRKGPW TQAEDKLLVD HVRRHGEGNW NTVRRETGLL RCGKSCRLRW ANHLRPNLRK GPFSPEEERH ILILHGLNGN
101: KWAKISSYLP GRTDNEIKNY WNTRLKRRQR AGLPLYPPDV ERDIAILRAQ NADADANAHA NANASLPPPP PLLYDASNPF VALPPTMPSP SPTHSPLQIN
201: QNYPLLNQMQ VFHHIGGSHH QQQQQPQPAF HQDNGSAAAA FGSGIVSSGL PPLPTATARA QQLELPSNQQ FDTSSSGSGS GSVGLLESML IGDEHLMLRP
301: NPSMVKVPSM PALSYREPAG SRLLPAHGVG SDGDVTSHAH ALCPPGEDIH HGATWDFTFE AVKPAKRRTA SEVGISDMFA IAPAGDWFGT CGGSTGPSSA
401: VTDDEFNLEM QQFMSLLPLS IDEHGCNA
Best Arabidopsis Sequence Match ( AT2G32460.1 )
(BLAST)
001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
Arabidopsis Description
MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.