Factsheet for GSMUA_Achr4P27730_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13930_001	Banana	nucleus	50.14	54.1
GSMUA_Achr4P23690_001	Banana	nucleus	32.96	31.79
GSMUA_Achr7P00280_001	Banana	nucleus	27.61	30.06
HORVU7Hr1G105450.1	Barley	nucleus	23.94	25.6
TraesCS7A01G458700.1	Wheat	nucleus	27.04	23.76
HORVU7Hr1G105520.2	Barley	nucleus	25.92	23.59
GSMUA_Achr10P...	Banana	nucleus	25.63	23.58
TraesCS7D01G446700.1	Wheat	nucleus	26.48	23.5
TraesCS7B01G357900.1	Wheat	nucleus	26.48	23.5
GSMUA_Achr7P21550_001	Banana	nucleus	8.73	23.48
TraesCS7D01G130100.1	Wheat	nucleus	28.17	23.47
HORVU7Hr1G027370.1	Barley	nucleus	28.17	23.42
TraesCS7A01G130700.1	Wheat	nucleus	27.89	23.4
TraesCS7B01G031000.1	Wheat	nucleus	27.61	23.22
EER90224	Sorghum	nucleus	27.32	22.66
Zm00001d014364_P002	Maize	nucleus	25.63	22.64
TraesCS6A01G137800.1	Wheat	nucleus	25.63	22.64
TraesCS6D01G126900.1	Wheat	nucleus	24.79	22.06
Zm00001d033075_P001	Maize	nucleus	22.82	21.77
Os06t0679400-01	Rice	nucleus	27.32	21.7
HORVU6Hr1G026450.1	Barley	nucleus	24.23	21.5
KXG38121	Sorghum	nucleus	27.61	21.44
Zm00001d013801_P001	Maize	nucleus	27.32	21.13
GSMUA_AchrUn_...	Banana	nucleus	29.58	18.36
GSMUA_Achr1P17150_001	Banana	nucleus	29.86	18.09
Zm00001d036577_P001	Maize	nucleus	23.94	16.63
Os03t0578900-00	Rice	nucleus	24.23	16.29
GSMUA_Achr7P21560_001	Banana	nucleus	20.0	16.28
GSMUA_Achr7P02510_001	Banana	nucleus	25.35	16.04
GSMUA_Achr1P01660_001	Banana	nucleus	13.52	14.91

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSMUA_Achr4G27730_001	EnsemblPlants:GSMUA_Achr4P27730_001	EnsemblPlants:GSMUA_Achr4T27730_001
InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0SSN5	InterPro:Myb_dom	PFAM:PF00249	InterPro:PG/BPGM_mutase_AS
ScanProsite:PS00175	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF475	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI00029616AA	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G27730_001]

Coordinates

chr4:+:26467154..26468445

Molecular Weight (calculated)

38399.4 Da

IEP (calculated)

5.586

GRAVY (calculated)

-0.452

Length

355 amino acids

Sequence
(BLAST)

001: MGGGGEELKK GPWTPAEDAV LVEHVRRHGE GNWNALGNKW ARIAAQLPGR TDNEIKNYWN TRLKRRQRAG LPIYPPDLQE AVRFDRHHQQ QHQAPISPRP
101: LTPPPLLNPV DFHPPPRISL PPLPQNPFAC QLGFGFLVSP LAPPPTPNSL FQQQHQIGPP PPLSPAFAVE TELPSCQSYS GLVGGDNGQS SSGLLESLLQ
201: GTGVAEDMRI GELLALQAAD EQVARWAQIF GDDGDEGIKE ASQGFSLGSA TKLDRDMGEF GQTQSPCFSL MGRTLLLHPS HKSSTVFYAG TEIKCEPPGG
301: GSPMKGDTST LLDVQALTMS LVLKSNELAS SLSITSADED CNISSWPWSN MPGIR

Best Arabidopsis Sequence Match ( AT4G26930.1 )
(BLAST)

001: MIVYGGGASE DGEGGGVVLK KGPWTVAEDE TLAAYVREYG EGNWNSVQKK TWLARCGKSC RLRWANHLRP NLRKGSFTPE EERLIIQLHS QLGNKWARMA
101: AQLPGRTDNE IKNYWNTRLK RFQRQGLPLY PPEYSQNNHQ QQMYPQQPSS PLPSQTPASS FTFPLLQPPS LCPKRCYNTA FSPKASYISS PTNFLVSSPT
201: FLHTHSSLSS YQSTNPVYSM KHELSSNQIP YSASLGVYQV SKFSDNGDCN QNLNTGLHTN TCQLLEDLME EAEALADSFR APKRRQIMAA LEDNNNNNNF
301: FSGGFGHRVS SNSLCSLQGL TPKEDESLQM NTMQDEDITK LLDWGSESEE ISNGQSSVIT TENNLVLDDH QFAFLFPVDD DTNNLPGIC

Arabidopsis Description

MYB97Transcription factor MYB97 [Source:UniProtKB/Swiss-Prot;Acc:Q9S773]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.