Factsheet for TraesCS6A01G137800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G126900.1	Wheat	nucleus	96.27	96.99
HORVU6Hr1G026450.1	Barley	nucleus	90.3	90.75
TraesCS7A01G458700.1	Wheat	nucleus	48.26	48.02
GSMUA_Achr7P00280_001	Banana	nucleus	25.37	31.29
GSMUA_Achr4P23690_001	Banana	nucleus	28.61	31.25
TraesCS4A01G467100.1	Wheat	nucleus	19.4	27.56
TraesCS7A01G130700.1	Wheat	nucleus	28.36	26.95
GSMUA_Achr2P13930_001	Banana	nucleus	21.39	26.14
GSMUA_Achr4P27730_001	Banana	nucleus	22.64	25.63
TraesCS2A01G415400.1	Wheat	nucleus	19.4	23.49
TraesCS1A01G308100.2	Wheat	nucleus	26.12	22.88
TraesCS7A01G377100.1	Wheat	nucleus	26.12	21.52
TraesCS7A01G251700.1	Wheat	nucleus	18.91	21.29
TraesCS3A01G336500.1	Wheat	nucleus	28.61	19.62

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
PFAM:PF00249	InterPro:PG/BPGM_mutase_AS	ScanProsite:PS00175	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF616
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:TraesCS6A01G137800	EnsemblPlants:TraesCS6A01G137800.1	TIGR:cd00167
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:109113254..109114671

Molecular Weight (calculated)

43561.7 Da

IEP (calculated)

6.194

GRAVY (calculated)

-0.450

Length

402 amino acids

Sequence
(BLAST)

001: MAVEAPQQPE QAAGGSVEQG AAAGGGRLKK GPWTPDEDQL LVEHVRRHGE GSWNAVRRET GLLRCGKSCR LRWANHLRPN LKRGPFSPEE ERLILRLHAL
101: IGNKWARISA HLPGRTDNEI KNYWNTRLKR RKRAGLALYP PDVEREVALV RAGKLRPIVD ADGNASSLQA PLLLDAAADQ FAWPAAPPFH PAFNNVAPPQ
201: PFQFTGNISH NPQALLAAQV PYLHHDEVSA GLGHANKLYA DALGMPPLVP PSAQELPSNQ SPADAGGPLE MLVLEQDQRL PGAALLRVTS MPELVYNEND
301: YSAWPSGLSG GSGSRSEGDV TSHYGGKCDC FFDGVKPAKG MPASLAVAEE EVSGLFGGEE LVAVWPDKPP ESITKDDFNL QMMEMQHLMP PVPLPADEHG
401: LN

Best Arabidopsis Sequence Match ( AT2G32460.1 )
(BLAST)

001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC

Arabidopsis Description

MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.