Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G329400.1 | Wheat | nucleus | 97.44 | 96.94 |
| TraesCS3B01G367500.2 | Wheat | nucleus | 92.32 | 93.92 |
| HORVU3Hr1G079490.4 | Barley | nucleus | 92.66 | 87.86 |
| Os01t0812000-02 | Rice | nucleus | 81.23 | 86.08 |
| KXG33583 | Sorghum | nucleus | 78.84 | 83.09 |
| Zm00001d043131_P002 | Maize | nucleus | 76.62 | 80.32 |
| Zm00001d012544_P001 | Maize | nucleus | 60.24 | 71.75 |
| TraesCS1A01G308100.2 | Wheat | nucleus | 34.64 | 44.23 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 16.55 | 34.28 |
| TraesCS7A01G458700.1 | Wheat | nucleus | 21.5 | 31.19 |
| TraesCS7A01G130700.1 | Wheat | nucleus | 22.01 | 30.5 |
| TraesCS7A01G377100.1 | Wheat | nucleus | 23.89 | 28.69 |
| TraesCS6A01G137800.1 | Wheat | nucleus | 19.62 | 28.61 |
| TraesCS2A01G415400.1 | Wheat | nucleus | 14.68 | 25.9 |
| TraesCS7A01G251700.1 | Wheat | nucleus | 13.31 | 21.85 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | InterPro:GAMYB-like | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0048653 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PIRSF:PIRSF001693 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF475 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| EnsemblPlantsGene:TraesCS3A01G336500 | EnsemblPlants:TraesCS3A01G336500.1 | TIGR:cd00167 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3A:+:583240098..583245583
Molecular Weight (calculated)
63314.4 Da
IEP (calculated)
4.751
GRAVY (calculated)
-0.555
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFYKDIVGA SYSTGTSHPT QRANPAINPG HDGEMYRVKS ESDCEMMHQE DQMDSPVGDD GSSGGSPHRG GGPPLKKGPW TSAEDAILVD YVKKHGEGNW
101: NAVQKNTGLF RCGKSCRLRW ANHLRPNLKK GAFTPEEERL IIQLHSKMGN KWARMAAHLP GRTDNEIKNY WNTRIKRCQR AGLPIYPASV CNQSSNEDQQ
201: GSSDFNCGEN LSSDLLNGNG LYLPDFTCDN FIANSEALSY APQLSAVSIS SLLGQSFASK NCGFMDQVNQ AGMLKQSDPL LPGLSDTING ALSSVDQFSN
301: DSENLKKALG FDYLHEANSS SKMIAPFGGT LTGSHAFLNG TFSTSRTING PLKMELPSLQ DTESDPNSWL KYTVAPAMQP TELVDPYLQS PTATPSVKSE
401: CVSPRNSGLL EELLHEAQGL KSGKNQQLSV RSSSSSVSTP CDTTVVSPEF DICQDYWEEP LNEYAPFSGN SLTGSTAPVS AAPPDVFQLS KISPAQSPSL
501: GSGEQAMEPA YEPGAGDTSS HPENFRPDAL FSGNTTDSSV FNNAIAMLLG NDMNTDCKPV FGDGIVFDTS PWSNMPHACQ MSEEFK
101: NAVQKNTGLF RCGKSCRLRW ANHLRPNLKK GAFTPEEERL IIQLHSKMGN KWARMAAHLP GRTDNEIKNY WNTRIKRCQR AGLPIYPASV CNQSSNEDQQ
201: GSSDFNCGEN LSSDLLNGNG LYLPDFTCDN FIANSEALSY APQLSAVSIS SLLGQSFASK NCGFMDQVNQ AGMLKQSDPL LPGLSDTING ALSSVDQFSN
301: DSENLKKALG FDYLHEANSS SKMIAPFGGT LTGSHAFLNG TFSTSRTING PLKMELPSLQ DTESDPNSWL KYTVAPAMQP TELVDPYLQS PTATPSVKSE
401: CVSPRNSGLL EELLHEAQGL KSGKNQQLSV RSSSSSVSTP CDTTVVSPEF DICQDYWEEP LNEYAPFSGN SLTGSTAPVS AAPPDVFQLS KISPAQSPSL
501: GSGEQAMEPA YEPGAGDTSS HPENFRPDAL FSGNTTDSSV FNNAIAMLLG NDMNTDCKPV FGDGIVFDTS PWSNMPHACQ MSEEFK
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.