CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043131_P002	Maize	nucleus	94.24	93.74
Os01t0812000-02	Rice	nucleus	82.91	83.36
Zm00001d012544_P001	Maize	nucleus	72.66	82.11
TraesCS3B01G367500.2	Wheat	nucleus	82.91	80.03
TraesCS3A01G336500.1	Wheat	nucleus	83.09	78.84
TraesCS3D01G329400.1	Wheat	nucleus	83.09	78.44
HORVU3Hr1G079490.4	Barley	nucleus	84.17	75.73
KXG38121	Sorghum	nucleus	24.46	29.76
EER90224	Sorghum	nucleus	22.84	29.67
KXG20323	Sorghum	nucleus	24.1	28.39
EES15365	Sorghum	nucleus	13.85	24.92
EES11224	Sorghum	nucleus	15.47	22.75

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	UniProt:A0A1B6Q6N8	InterPro:GAMYB-like	GO:GO:0000003	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009791	GO:GO:0009908
GO:GO:0009987	GO:GO:0048653	InterPro:Homeobox-like_sf	InterPro:IPR017930	EnsemblPlants:KXG33583	ProteinID:KXG33583
ProteinID:KXG33583.1	InterPro:Myb_dom	PFAM:PF00249	PIRSF:PIRSF001693	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF475	InterPro:SANT/Myb	SMART:SM00717	EnsemblPlantsGene:SORBI_3003G331100	SUPFAM:SSF46689	UniParc:UPI00081ABBF0
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:65598621..65602432

Molecular Weight (calculated)

60194.9 Da

IEP (calculated)

4.901

GRAVY (calculated)

-0.530

Length

556 amino acids

Sequence
(BLAST)

001: MYRVKSEGEG DCEMMLQDQM DSPVADDVSS GGGSPHPHRG AGPPLKKGPW TSAEDAILVD YVKKHGEGNW NAVQKNTGLF RCGKSCRLRW ANHLRPNLKK
101: GAFTPEEERL IIQLHAKMGN KWARMAAHLP GRTDNEIKNY WNTRIKRCQR ASLPIYPASV CNQSSNEDQQ VSGDYNGGEN ISNDLLSGNS LYLPDFTSDN
201: FIANPEALSY APQLSAVSIS NLLGQSFASK NCSFMDQVDQ AGMLKQSSCV LPALSDAIDG VLSSVDQFSN DSEKLKQALG FDYLNEANAS SKSIAPFGVA
301: LTGSHAFLNG NFSASRPTNG PLKMELPSLQ DTESDPNSWL KYTVAPAMQP TELVDPYLQS PSATPSVKSE CASPRNSGLL EELLHEAQAL RSGKNQQPSV
401: RSSSSSAGTP CETTTVVSPE FDMGQEYWEE QPGSFLSEYA HFSGNSLTES TPVSAASPDF FQFSKISPAQ SPSMGSGEQA LEPKHESAAS PHPENLRPDA
501: LFSGNTADPS IFNNAIAMLM GNGINAEYKH VLGDGVVLDS SSWNNMPHAF QMTEFK

Best Arabidopsis Sequence Match ( AT5G06100.4 )
(BLAST)

001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP

Arabidopsis Description

MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.