Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G336500.1 | Wheat | nucleus | 96.94 | 97.44 |
| TraesCS3B01G367500.2 | Wheat | nucleus | 91.51 | 93.58 |
| HORVU3Hr1G079490.4 | Barley | nucleus | 92.36 | 88.03 |
| Os01t0812000-02 | Rice | nucleus | 80.98 | 86.26 |
| KXG33583 | Sorghum | nucleus | 78.44 | 83.09 |
| Zm00001d043131_P002 | Maize | nucleus | 76.23 | 80.32 |
| Zm00001d012544_P001 | Maize | nucleus | 60.1 | 71.95 |
| TraesCS1D01G307500.2 | Wheat | nucleus | 33.96 | 43.57 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 21.39 | 31.5 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 22.24 | 30.75 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 19.52 | 28.82 |
| TraesCS7D01G373400.1 | Wheat | mitochondrion, nucleus | 23.6 | 26.89 |
| TraesCS2D01G412500.1 | Wheat | nucleus | 14.6 | 25.9 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | InterPro:GAMYB-like | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0048653 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PIRSF:PIRSF001693 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF475 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| EnsemblPlantsGene:TraesCS3D01G329400 | EnsemblPlants:TraesCS3D01G329400.1 | TIGR:cd00167 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3D:+:442169382..442175781
Molecular Weight (calculated)
63542.7 Da
IEP (calculated)
4.803
GRAVY (calculated)
-0.562
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFYEDIVGA SYSTGTSPPT KRASPKNPAI NPGHDGEMYR VKSESDCEMM HQEDQMDSPV GDDGSSGGSP HRGGGPPLKK GPWTSAEDAI LVDYVKKHGE
101: GNWNAVQKNT GLFRCGKSCR LRWANHLRPN LKKGAFTPEE ERLIIQLHSK MGNKWARMAA HLPGRTDNEI KNYWNTRIKR CQRAGLPIYP ASVCNQSSNE
201: DQQGSSDFNC GENLSSDLLN GNGLYLPDFT CDNFIANSEA LSYAPQLSAV SISSLLGQSF ASKNCGFMGQ VNQAGMLKQP DPLLPGLSDT INGALSSVDQ
301: FSNDSENLKK ALGFDYLHEA NSSSKIIAPF GGALTGSHAF LNGTFSTSRT INGPLKMELP SLQDTESDPN SWLKYTVAPA MQPTELVDPY LQSPTATPSV
401: KSECVSPRNS GLLEELLHEA QGLRSGKNQQ LSVRSSSSSV STPCDTTVVS PEFDLCQDYW DEPLNEYAPF SGNSLTGSTA PVSAASPDGF QLSKISPAQS
501: PSLGSGEQAM EPAYEPGAGD TSSHPENFRP DALFSGNTTD SSVFNNAIAM LLSNDMNTDC KPVFGDGIVF DTSSWSNMPH ACQMSEEFK
101: GNWNAVQKNT GLFRCGKSCR LRWANHLRPN LKKGAFTPEE ERLIIQLHSK MGNKWARMAA HLPGRTDNEI KNYWNTRIKR CQRAGLPIYP ASVCNQSSNE
201: DQQGSSDFNC GENLSSDLLN GNGLYLPDFT CDNFIANSEA LSYAPQLSAV SISSLLGQSF ASKNCGFMGQ VNQAGMLKQP DPLLPGLSDT INGALSSVDQ
301: FSNDSENLKK ALGFDYLHEA NSSSKIIAPF GGALTGSHAF LNGTFSTSRT INGPLKMELP SLQDTESDPN SWLKYTVAPA MQPTELVDPY LQSPTATPSV
401: KSECVSPRNS GLLEELLHEA QGLRSGKNQQ LSVRSSSSSV STPCDTTVVS PEFDLCQDYW DEPLNEYAPF SGNSLTGSTA PVSAASPDGF QLSKISPAQS
501: PSLGSGEQAM EPAYEPGAGD TSSHPENFRP DALFSGNTTD SSVFNNAIAM LLSNDMNTDC KPVFGDGIVF DTSSWSNMPH ACQMSEEFK
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.