Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G367500.2 | Wheat | nucleus | 88.03 | 94.44 |
| TraesCS3A01G336500.1 | Wheat | nucleus | 87.86 | 92.66 |
| TraesCS3D01G329400.1 | Wheat | nucleus | 88.03 | 92.36 |
| Os01t0812000-02 | Rice | nucleus | 77.83 | 86.98 |
| KXG33583 | Sorghum | nucleus | 75.73 | 84.17 |
| Zm00001d043131_P002 | Maize | nucleus | 73.62 | 81.4 |
| Zm00001d012544_P001 | Maize | nucleus | 58.09 | 72.97 |
| HORVU1Hr1G068520.6 | Barley | nucleus | 32.36 | 40.4 |
| HORVU0Hr1G001230.9 | Barley | nucleus | 32.2 | 40.2 |
| HORVU7Hr1G051740.1 | Barley | nucleus | 10.52 | 39.39 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 18.93 | 35.24 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 19.74 | 31.28 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 21.36 | 30.91 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 18.77 | 29.0 |
| HORVU7Hr1G090120.1 | Barley | mitochondrion, nucleus | 21.52 | 28.18 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A287LUM1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009555 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0048653 | EnsemblPlantsGene:HORVU3Hr1G079490 | EnsemblPlants:HORVU3Hr1G079490.4 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF475 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000B47224B | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:-:583536144..583539915
Molecular Weight (calculated)
66961.7 Da
IEP (calculated)
4.524
GRAVY (calculated)
-0.584
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: GIPLRAERER EKEILLPCPH SPDPPPSRDE EEEELQLSSA PAQPPEPELI DPPAARFGQG TIDGEMYRVK SESDCEMMHQ EDQMDSPVGD DGSSGGGSPH
101: RGGGPPLKKG PWTSAEDAIL VDYVKKHGEG NWNAVQKNTG LFRCGKSCRL RWANHLRPNL KKGAFTPEEE RLIIQLHSKM GNKWARMAAH LPGRTDNEIK
201: NYWNTRIKRC QRAGLPIYPA SVCNQSSNED QQGSSDFNCG ENLSSDLLNG NGLYLPDFTC DNFIANSEAL SYAPQLSAVS ISSLLGQSFA SKNCGFMDQV
301: NQAGMLKQSD PLLPGLSDTI NGALSSVDQF SNDSEKLKQA LGFDYLHEAN SSSKIIAPFG GALTGSHAFL NGTFSTSRTI NGPLKMELPS LQDTESDPNS
401: WLKYTVAPAM QPTELVDPYL QSPTATPSVK SECASPRNSG LLEELLHEAQ GLRSGKNQQL SVRSSSSSVS TPCDTTVVSP EFDLCQEYWE ERLNEYAPFS
501: GNSLTGSTAP MSAASPDVFQ LSKISPAQSP SLGSGEQAME PAYEPGAGDT SSHPENLRPD AFFSGNTADS SVFNNAIAML LGNDMNTECK PVFGDGIMFD
601: TSVWSNLPHA CQMSEEFK
101: RGGGPPLKKG PWTSAEDAIL VDYVKKHGEG NWNAVQKNTG LFRCGKSCRL RWANHLRPNL KKGAFTPEEE RLIIQLHSKM GNKWARMAAH LPGRTDNEIK
201: NYWNTRIKRC QRAGLPIYPA SVCNQSSNED QQGSSDFNCG ENLSSDLLNG NGLYLPDFTC DNFIANSEAL SYAPQLSAVS ISSLLGQSFA SKNCGFMDQV
301: NQAGMLKQSD PLLPGLSDTI NGALSSVDQF SNDSEKLKQA LGFDYLHEAN SSSKIIAPFG GALTGSHAFL NGTFSTSRTI NGPLKMELPS LQDTESDPNS
401: WLKYTVAPAM QPTELVDPYL QSPTATPSVK SECASPRNSG LLEELLHEAQ GLRSGKNQQL SVRSSSSSVS TPCDTTVVSP EFDLCQEYWE ERLNEYAPFS
501: GNSLTGSTAP MSAASPDVFQ LSKISPAQSP SLGSGEQAME PAYEPGAGDT SSHPENLRPD AFFSGNTADS SVFNNAIAML LGNDMNTECK PVFGDGIMFD
601: TSVWSNLPHA CQMSEEFK
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.