Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G336500.1 | Wheat | nucleus | 93.92 | 92.32 |
| TraesCS3D01G329400.1 | Wheat | nucleus | 93.58 | 91.51 |
| HORVU3Hr1G079490.4 | Barley | nucleus | 94.44 | 88.03 |
| Os01t0812000-02 | Rice | nucleus | 82.81 | 86.26 |
| KXG33583 | Sorghum | nucleus | 80.03 | 82.91 |
| Zm00001d043131_P002 | Maize | nucleus | 77.78 | 80.14 |
| Zm00001d012544_P001 | Maize | nucleus | 61.46 | 71.95 |
| TraesCS1B01G318800.3 | Wheat | nucleus | 35.07 | 44.01 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 22.22 | 32.0 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 22.05 | 30.09 |
| TraesCS7B01G278400.1 | Wheat | nucleus | 23.96 | 28.34 |
| TraesCS2B01G434400.1 | Wheat | nucleus | 14.93 | 25.98 |
| TraesCS7B01G139400.1 | Wheat | nucleus | 13.54 | 21.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | InterPro:GAMYB-like | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0048653 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PIRSF:PIRSF001693 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF475 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| EnsemblPlantsGene:TraesCS3B01G367500 | EnsemblPlants:TraesCS3B01G367500.2 | TIGR:cd00167 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3B:+:579450491..579453443
Molecular Weight (calculated)
62357.4 Da
IEP (calculated)
4.856
GRAVY (calculated)
-0.528
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLLCSIWEG SNSNLVVSPG HDGEMYRVKS ESDCEMMHQE DQMDSPVGDD GSSGGSPHRG GGPPLKKGPW TSAEDAILVD YVKKHGEGNW NAVQKNTGLF
101: RCGKSCRLRW ANHLRPNLKK GAFTPEEERL IIQLHSKMGN KWARMAAHLP GRTDNEIKNY WNTRIKRCQR AGLPIYPASV CNQSSNEDQG SSDFNCGENL
201: SSDLLNGNGL YLPDFTCDNF IANSEALSYA PQLSAVSISS LLGQSFASKN CGFMDQVNQA GMLKQSDHLL PGLSDTINGA LSSVDQFPND SEKLKKALGF
301: DYLHEANSSS KTIAPFGGAL TGSHAFLNGT FSTSRTINGP LKMELPSLQD TESDPNSWLK YTVAPAMQPT ELVDPYLQSP TATPSVKSEC ASPRNSGLLE
401: ELLHEAQGLR SGRNQQLSVR SSSSSVSTPC DTTVISPEFD LCQEYWEERL NEYAAPFSGN SLTGSTAPVS AASPDVFQLS KLSPAQSPSL GSGEQAMEPA
501: YEPGAGDTSS HPENFRPDAF FSGNTTDSSV FNNAIAMLLG NDMNTDCKPV FGHGIVFDTS PWSNMPHACQ MSEEFK
101: RCGKSCRLRW ANHLRPNLKK GAFTPEEERL IIQLHSKMGN KWARMAAHLP GRTDNEIKNY WNTRIKRCQR AGLPIYPASV CNQSSNEDQG SSDFNCGENL
201: SSDLLNGNGL YLPDFTCDNF IANSEALSYA PQLSAVSISS LLGQSFASKN CGFMDQVNQA GMLKQSDHLL PGLSDTINGA LSSVDQFPND SEKLKKALGF
301: DYLHEANSSS KTIAPFGGAL TGSHAFLNGT FSTSRTINGP LKMELPSLQD TESDPNSWLK YTVAPAMQPT ELVDPYLQSP TATPSVKSEC ASPRNSGLLE
401: ELLHEAQGLR SGRNQQLSVR SSSSSVSTPC DTTVISPEFD LCQEYWEERL NEYAAPFSGN SLTGSTAPVS AASPDVFQLS KLSPAQSPSL GSGEQAMEPA
501: YEPGAGDTSS HPENFRPDAF FSGNTTDSSV FNNAIAMLLG NDMNTDCKPV FGHGIVFDTS PWSNMPHACQ MSEEFK
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.