Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G446700.1 | Wheat | nucleus | 94.0 | 94.0 |
| TraesCS7A01G458700.1 | Wheat | nucleus | 92.0 | 91.09 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 86.5 | 88.72 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 70.25 | 84.64 |
| Os06t0679400-01 | Rice | nucleus | 68.0 | 60.85 |
| Zm00001d014364_P002 | Maize | nucleus | 59.25 | 58.96 |
| EER90224 | Sorghum | nucleus | 60.5 | 56.54 |
| CDY72198 | Canola | nucleus | 21.75 | 42.86 |
| CDY69320 | Canola | nucleus | 21.75 | 42.86 |
| Zm00001d036577_P001 | Maize | nucleus | 51.75 | 40.51 |
| GSMUA_Achr7P00280_001 | Banana | nucleus | 25.5 | 31.29 |
| GSMUA_Achr4P23690_001 | Banana | nucleus | 28.5 | 30.98 |
| AT4G26930.1 | Thale cress | nucleus | 30.0 | 30.85 |
| CDY19890 | Canola | nucleus | 31.0 | 28.9 |
| CDY67258 | Canola | nucleus | 31.0 | 28.84 |
| KRH14648 | Soybean | extracellular, golgi | 24.25 | 28.53 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 29.5 | 27.96 |
| CDY20794 | Canola | nucleus | 28.25 | 27.49 |
| GSMUA_Achr2P13930_001 | Banana | nucleus | 22.5 | 27.36 |
| KRH46194 | Soybean | nucleus | 31.0 | 27.13 |
| KRH46191 | Soybean | nucleus | 31.0 | 26.9 |
| Bra021791.1-P | Field mustard | nucleus | 26.0 | 26.8 |
| GSMUA_Achr4P27730_001 | Banana | nucleus | 23.5 | 26.48 |
| KRH46196 | Soybean | nucleus | 24.25 | 26.43 |
| PGSC0003DMT400036086 | Potato | nucleus | 31.25 | 26.26 |
| TraesCS2B01G434400.1 | Wheat | nucleus | 21.0 | 25.38 |
| CDY15321 | Canola | nucleus | 28.0 | 25.0 |
| VIT_12s0059g00700.t01 | Wine grape | nucleus | 26.5 | 24.88 |
| CDY66700 | Canola | nucleus | 27.5 | 24.77 |
| CDY19141 | Canola | nucleus | 27.5 | 24.77 |
| Bra000531.1-P | Field mustard | nucleus | 26.75 | 24.6 |
| CDY38535 | Canola | nucleus | 26.5 | 24.54 |
| KRG98748 | Soybean | nucleus | 32.25 | 24.39 |
| CDX83247 | Canola | nucleus | 26.5 | 24.37 |
| Bra002042.1-P | Field mustard | nucleus | 28.5 | 24.26 |
| VIT_06s0009g02480.t01 | Wine grape | nucleus | 31.5 | 24.05 |
| Solyc06g073640.2.1 | Tomato | nucleus | 30.25 | 24.01 |
| CDY66041 | Canola | nucleus | 28.75 | 23.91 |
| PGSC0003DMT400015156 | Potato | nucleus | 30.0 | 23.9 |
| PGSC0003DMT400058426 | Potato | nucleus | 31.25 | 23.9 |
| PGSC0003DMT400074486 | Potato | nucleus | 28.75 | 23.76 |
| TraesCS1B01G318800.3 | Wheat | nucleus | 27.0 | 23.53 |
| Bra002938.1-P | Field mustard | nucleus | 33.75 | 23.48 |
| Solyc07g052300.2.1 | Tomato | nucleus | 28.5 | 23.46 |
| CDY68663 | Canola | nucleus | 26.75 | 23.41 |
| KRH22574 | Soybean | nucleus | 28.0 | 23.38 |
| KRH62709 | Soybean | nucleus | 29.75 | 23.33 |
| VIT_19s0090g00590.t01 | Wine grape | nucleus | 27.0 | 23.28 |
| KRH26778 | Soybean | nucleus | 27.75 | 23.27 |
| Bra022888.1-P | Field mustard | nucleus | 26.5 | 23.19 |
| AT2G26960.1 | Thale cress | nucleus | 24.75 | 23.18 |
| CDY08526 | Canola | nucleus | 29.0 | 23.11 |
| CDY56849 | Canola | nucleus | 29.0 | 23.06 |
| Bra028997.1-P | Field mustard | nucleus | 31.75 | 22.97 |
| KRH56248 | Soybean | nucleus | 29.5 | 22.96 |
| AT2G32460.1 | Thale cress | nucleus | 28.0 | 22.86 |
| KRG89766 | Soybean | nucleus | 29.75 | 22.84 |
| TraesCS7B01G139400.1 | Wheat | nucleus | 20.25 | 22.82 |
| CDY61426 | Canola | nucleus | 31.75 | 22.8 |
| AT5G55020.1 | Thale cress | nucleus | 29.75 | 22.75 |
| CDY43016 | Canola | nucleus | 31.5 | 22.74 |
| Bra005597.1-P | Field mustard | nucleus | 27.0 | 22.55 |
| CDY48264 | Canola | nucleus | 27.0 | 22.55 |
| Solyc01g009070.2.1 | Tomato | nucleus | 30.25 | 22.53 |
| CDY12203 | Canola | nucleus | 27.0 | 22.45 |
| Bra034842.1-P | Field mustard | nucleus | 29.0 | 22.44 |
| VIT_13s0067g01630.t01 | Wine grape | nucleus | 31.25 | 22.36 |
| KRH20589 | Soybean | nucleus | 29.75 | 22.33 |
| Bra035547.1-P | Field mustard | nucleus | 30.25 | 22.32 |
| TraesCS3B01G367500.2 | Wheat | nucleus | 32.0 | 22.22 |
| TraesCS7B01G278400.1 | Wheat | nucleus | 27.0 | 22.18 |
| KRH13249 | Soybean | nucleus | 29.5 | 22.14 |
| AT5G06100.4 | Thale cress | nucleus | 28.75 | 22.12 |
| KRH18640 | Soybean | nucleus | 29.5 | 22.1 |
| PGSC0003DMT400070549 | Potato | nucleus | 26.0 | 21.44 |
| AT3G11440.1 | Thale cress | nucleus | 29.5 | 21.34 |
| AT2G26950.1 | Thale cress | cytosol | 20.0 | 20.94 |
| Solyc12g005890.1.1 | Tomato | nucleus | 21.0 | 20.74 |
| CDX71481 | Canola | nucleus | 28.25 | 19.82 |
| Solyc11g072060.1.1 | Tomato | nucleus | 25.25 | 18.7 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| PFAM:PF13921 | InterPro:PG/BPGM_mutase_AS | ScanProsite:PS00175 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF616 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS7B01G357900 | EnsemblPlants:TraesCS7B01G357900.1 | TIGR:cd00167 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:619588295..619592565
Molecular Weight (calculated)
43667.5 Da
IEP (calculated)
7.846
GRAVY (calculated)
-0.662
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAMDTTMP RSGVGEGGGG GGLKKGPWTQ AEDQVLLDHV RRHGEGNWNA VRRETGLQRC GKSCRLRWAN HLRPNLRKGP FSPEEERLIL RLHGLIGNKW
101: ARISTHLPGR TDNEVKNFWN TRLKRRQRAG QSLYPPDVER EIALMRAQNI NPFADADGNT VASPFLGPFA LPPRPPSSTK QASHSHSHSS PLINQHYQLL
201: NQMQGMQMRH HAVQHHHQQP AFHYHGGIRS PGLPPLPTRP RELPSNQIEM ASCSGGGDGL LEALLLGVDE HQLPRPNHAV CRAGSMPDLM YGGVASGSDS
301: DVTSQFPPAP GGQDPHHGGK WDFLVDDMKP TMRRATSAAE NETSGMFGVA HGSISGEWFG TGVGSPGPSS VVTTDDEFGL EMQQLMSSLP LSADELNWNA
101: ARISTHLPGR TDNEVKNFWN TRLKRRQRAG QSLYPPDVER EIALMRAQNI NPFADADGNT VASPFLGPFA LPPRPPSSTK QASHSHSHSS PLINQHYQLL
201: NQMQGMQMRH HAVQHHHQQP AFHYHGGIRS PGLPPLPTRP RELPSNQIEM ASCSGGGDGL LEALLLGVDE HQLPRPNHAV CRAGSMPDLM YGGVASGSDS
301: DVTSQFPPAP GGQDPHHGGK WDFLVDDMKP TMRRATSAAE NETSGMFGVA HGSISGEWFG TGVGSPGPSS VVTTDDEFGL EMQQLMSSLP LSADELNWNA
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.