Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G377100.1 | Wheat | nucleus | 89.73 | 89.55 |
| TraesCS7D01G373400.1 | Wheat | mitochondrion, nucleus | 91.38 | 86.07 |
| HORVU7Hr1G090120.1 | Barley | mitochondrion, nucleus | 75.36 | 77.75 |
| Os06t0605750-00 | Rice | nucleus | 18.07 | 51.46 |
| Zm00001d046518_P001 | Maize | nucleus | 29.16 | 35.41 |
| Zm00001d046517_P001 | Maize | nucleus | 29.16 | 35.41 |
| KXG20323 | Sorghum | nucleus | 34.09 | 35.17 |
| Zm00001d046519_P001 | Maize | nucleus | 28.75 | 34.91 |
| Zm00001d036551_P001 | Maize | nucleus | 24.44 | 27.05 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 22.18 | 27.0 |
| TraesCS1B01G318800.3 | Wheat | nucleus | 25.26 | 26.8 |
| Os06t0605600-01 | Rice | cytosol, mitochondrion, nucleus | 18.07 | 25.66 |
| TraesCS2B01G434400.1 | Wheat | nucleus | 16.43 | 24.17 |
| TraesCS3B01G367500.2 | Wheat | nucleus | 28.34 | 23.96 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 20.74 | 23.93 |
| Zm00001d000361_P001 | Maize | nucleus | 24.64 | 23.21 |
| TraesCS7B01G139400.1 | Wheat | nucleus | 14.58 | 20.0 |
| Zm00001d036883_P001 | Maize | nucleus | 17.04 | 17.93 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G278400.1 | EnsemblPlantsGene:TraesCS7B01G278400 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF938 | PFAM:PF13921 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:509566354..509569289
Molecular Weight (calculated)
54068.1 Da
IEP (calculated)
4.631
GRAVY (calculated)
-0.757
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKGATLVL PELLKEEVHS PPLSPLSPRS SDDEEIEADD SDGEEEEGGA PVGTGGAVAS GPPMKKGPWT SDEDQRLRTY VEAHGEGNWN QVQRNAGLNR
101: CGKSCRLRWA NHLRPNLKKG PFSKEEEQKI IELHALHGNK WAKMASVLEG RTDNEIKNFW NTRTKRLQKA GLGLYPDGLL SRLANQEMGS HSPDDSRGKK
201: RPNELSQGNG LAFDDIIFEK LDYKKQSDNF LTPNFTIQDS LPMNDINYPL KRHASSGIVS DYGGSPKCEQ FSNETEEASY NDLNTEMSIV SFNNVISNST
301: PLLDGNFPIS GNIPWPIKME LPSFQYAGYD TSTSLCPAST LPEQVHGFGV PTKFEGEFDS ELPFSHVYPY IPHSSVFDDN TLEYSSFNEL RTYKSPTDSD
401: AIFMDNKHNA DIFQDKYFSS DPCATDVSAE ATFLNEDSTH SEYQPSNGPL NALFYGHFCN DVALSARDDH QTVSSNGIHS TQHLSGY
101: CGKSCRLRWA NHLRPNLKKG PFSKEEEQKI IELHALHGNK WAKMASVLEG RTDNEIKNFW NTRTKRLQKA GLGLYPDGLL SRLANQEMGS HSPDDSRGKK
201: RPNELSQGNG LAFDDIIFEK LDYKKQSDNF LTPNFTIQDS LPMNDINYPL KRHASSGIVS DYGGSPKCEQ FSNETEEASY NDLNTEMSIV SFNNVISNST
301: PLLDGNFPIS GNIPWPIKME LPSFQYAGYD TSTSLCPAST LPEQVHGFGV PTKFEGEFDS ELPFSHVYPY IPHSSVFDDN TLEYSSFNEL RTYKSPTDSD
401: AIFMDNKHNA DIFQDKYFSS DPCATDVSAE ATFLNEDSTH SEYQPSNGPL NALFYGHFCN DVALSARDDH QTVSSNGIHS TQHLSGY
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.