Factsheet for Zm00001d046518_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046517_P001	Maize	nucleus	100.0	100.0
Zm00001d046519_P001	Maize	nucleus	98.75	98.75
KXG20323	Sorghum	nucleus	68.33	58.05
Os06t0605750-00	Rice	nucleus	17.46	40.94
Zm00001d036551_P001	Maize	nucleus	33.67	30.68
TraesCS7A01G377100.1	Wheat	nucleus	36.41	29.92
TraesCS7B01G278400.1	Wheat	nucleus	35.41	29.16
HORVU7Hr1G090120.1	Barley	mitochondrion, nucleus	34.16	29.03
TraesCS7D01G373400.1	Wheat	mitochondrion, nucleus	36.16	28.05
Zm00001d000361_P001	Maize	nucleus	35.41	27.47
Zm00001d033075_P001	Maize	nucleus	22.19	23.92
Zm00001d014364_P002	Maize	nucleus	22.94	22.89
Zm00001d012544_P001	Maize	nucleus	26.68	21.75
Zm00001d043131_P002	Maize	nucleus	29.93	21.47
Os06t0605600-01	Rice	cytosol, mitochondrion, nucleus	17.71	20.7
Zm00001d031515_P001	Maize	nucleus	14.96	20.41
Zm00001d013801_P001	Maize	nucleus	22.94	20.04
Zm00001d036883_P001	Maize	nucleus	22.69	19.65
Zm00001d026186_P001	Maize	nucleus	16.21	18.79
Zm00001d002750_P001	Maize	nucleus	15.96	18.6
Zm00001d036577_P001	Maize	nucleus	22.94	18.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	ProteinID:AQL04424.1	ProteinID:AQL04425.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7VW09	InterPro:Myb_dom
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF475	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000220E5D7	EnsemblPlantsGene:Zm00001d046518	EnsemblPlants:Zm00001d046518_P001	EnsemblPlants:Zm00001d046518_T001	SEG:seg

Description

MYB-transcription factor 82Putative MYB DNA-binding domain superfamily protein

Coordinates

chr9:-:93438079..93444871

Molecular Weight (calculated)

44829.8 Da

IEP (calculated)

6.144

GRAVY (calculated)

-0.618

Length

401 amino acids

Sequence
(BLAST)

001: MTVVEAGEVL NLKVGENPLL EGEAKTGYVS PDDQDGETAS EKPCGAPQLK KGPWSPDEDK LLKNYVEAHG EGKWNKVQRN SGLNRCGKSC RLRWTNHLRP
101: DLKKGPFDNE EIDKILKFYL KWGPKWAKIA SRLPGRTDNE IKNFWNTRIK KTEKQGLPIY PEHVLSQVKQ PQQDMNCETP GLSHGKKRIR EIEIHDLMDV
201: KILFQHLDYH KDLVVPTKPL KRRASIGSLK ISGETKETYC STDLNYVLAR SESVPTGSAI ASGYPVELPS IQSSSSTLSN DWLLQCVSAS VEQQIHSSIQ
301: STETISSQTT GLLHTMSEIS FETLIPMVYP MIHSFGYSEH ESSPNTDIQA ANLSLGSDDV SQYYQVASFF DPGVPDTELG ASFFNDTPPE TSFLNQQKQV
401: S

Best Arabidopsis Sequence Match ( AT2G26960.1 )
(BLAST)

001: MGKVRQDSGS DDDNSIKKSF TKGPWTQAED NLLIAYVDKH GDGNWNAVQN NSGLSRCGKS CRLRWVNHLR PDLKKGAFTE KEEKRVIELH ALLGNKWARM
101: AEELPGRTDN EIKNFWNTRL KRLQRLGLPV YPDEVREHAM NAATHSGLNT DSLDGHHSQE YMEADTVEIP EVDFEHLPLN RSSSYYQSML RHVPPTNVFV
201: RQKPCFFQPP NVYNLIPPSP YMSTGKRPRE PETAFPCPGG YTMNEQSPRL WNYPFVENVS EQLPDSHLLG NAAYSSPPGP LVHGVENFEF PSFQYHEEPG
301: GWGADQPNPM PEHESDNTLV QSPLTAQTPS DCPSSSLYDG LLESVVYGSS GEKPATDTDS ESSLFQSFTP ANENITGKTC FLTLYALHAL HCLCNQFKKS
401: PLLHLHDKLN WCNKFRFNSF KSGTHIL

Arabidopsis Description

AtMYB81Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.