Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15365 | Sorghum | nucleus | 78.57 | 74.76 |
| HORVU7Hr1G051740.1 | Barley | nucleus | 36.73 | 65.45 |
| Bra007536.1-P | Field mustard | nucleus | 35.71 | 39.03 |
| KRH27535 | Soybean | nucleus | 39.8 | 38.87 |
| Zm00001d002750_P001 | Maize | nucleus | 45.24 | 38.66 |
| CDY41164 | Canola | nucleus | 35.71 | 38.6 |
| VIT_15s0021g02040.t01 | Wine grape | nucleus | 40.48 | 38.51 |
| CDX71809 | Canola | nucleus | 35.37 | 38.24 |
| KRH36402 | Soybean | nucleus | 39.8 | 38.24 |
| Zm00001d026186_P001 | Maize | nucleus | 44.9 | 38.15 |
| KRH48761 | Soybean | nucleus | 40.14 | 38.06 |
| KRH66578 | Soybean | nucleus | 39.8 | 37.62 |
| AT3G60460.1 | Thale cress | nucleus | 37.76 | 37.0 |
| Bra003413.1-P | Field mustard | nucleus | 36.39 | 36.77 |
| TraesCS7B01G139400.1 | Wheat | nucleus | 43.88 | 36.34 |
| TraesCS7A01G251700.1 | Wheat | nucleus | 43.88 | 36.13 |
| PGSC0003DMT400066066 | Potato | nucleus | 37.07 | 35.62 |
| CDX67827 | Canola | nucleus | 36.73 | 35.53 |
| CDY64759 | Canola | nucleus | 36.73 | 35.41 |
| Solyc10g019260.1.1 | Tomato | nucleus | 36.39 | 35.2 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 37.76 | 34.47 |
| Solyc01g090530.1.1 | Tomato | nucleus | 36.39 | 33.54 |
| Zm00001d033075_P001 | Maize | nucleus | 23.47 | 18.55 |
| Zm00001d014364_P002 | Maize | nucleus | 24.83 | 18.16 |
| Zm00001d013801_P001 | Maize | nucleus | 24.49 | 15.69 |
| Zm00001d036551_P001 | Maize | nucleus | 22.45 | 15.0 |
| Zm00001d046517_P001 | Maize | nucleus | 20.41 | 14.96 |
| Zm00001d046518_P001 | Maize | nucleus | 20.41 | 14.96 |
| Zm00001d046519_P001 | Maize | nucleus | 20.41 | 14.96 |
| Zm00001d036577_P001 | Maize | nucleus | 23.81 | 13.7 |
| Zm00001d012544_P001 | Maize | nucleus | 22.11 | 13.21 |
| Zm00001d043131_P002 | Maize | nucleus | 24.49 | 12.88 |
| Zm00001d000361_P001 | Maize | nucleus | 22.11 | 12.57 |
| Zm00001d036883_P001 | Maize | nucleus | 15.31 | 9.72 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103645151 | MapMan:15.5.2.1 | UniProt:A0A1D6KJA2 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | ProteinID:ONM03026.1 |
| PFAM:PF00249 | PFAM:PF13921 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF488 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004DEB2C4 | EnsemblPlantsGene:Zm00001d031515 | EnsemblPlants:Zm00001d031515_P001 | EnsemblPlants:Zm00001d031515_T001 |
| SEG:seg | : | : | : | : | : |
Description
MYB-transcription factor 98myb-like HTH transcriptional regulator family protein
Coordinates
chr1:+:192483919..192484951
Molecular Weight (calculated)
31928.5 Da
IEP (calculated)
8.057
GRAVY (calculated)
-0.592
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPYGGGREL SAWVRKGPWT EDEDEVLRRH VMENGPREWS SIRSKGLLPR TGKSCRLRWV NKLRPDIKKG CKFSADEERV VIDLQAQFGN KWARIATYLS
101: GRTDNDVKNF WSTRQKRLAR LQRAPGPRRR PGGASSSRGN KARTLLHTGG GGSSSSSRPA GDEQEPHPCT VAPLAIVLPT HCRYDGGAPA ELGSSSSSAT
201: PAAAIRLLSF CCGGGNGAES MAASGVDPLV FVDPDDEEAF CPEPLAVVPP TPFFGLDEEY LHFGSAAAKQ PDVRFDDLPP ETLDFFDLPP SGQP
101: GRTDNDVKNF WSTRQKRLAR LQRAPGPRRR PGGASSSRGN KARTLLHTGG GGSSSSSRPA GDEQEPHPCT VAPLAIVLPT HCRYDGGAPA ELGSSSSSAT
201: PAAAIRLLSF CCGGGNGAES MAASGVDPLV FVDPDDEEAF CPEPLAVVPP TPFFGLDEEY LHFGSAAAKQ PDVRFDDLPP ETLDFFDLPP SGQP
001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
Arabidopsis Description
DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.