CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27535	Soybean	nucleus	90.2	91.69
Os06t0118150-00	Rice	nucleus	19.61	60.0
HORVU7Hr1G051740.1	Barley	nucleus	32.03	59.39
KRH66578	Soybean	nucleus	42.16	41.48
KRH48761	Soybean	nucleus	41.83	41.29
Zm00001d031515_P001	Maize	nucleus	38.24	39.8
TraesCS2B01G434400.1	Wheat	nucleus	42.81	39.58
TraesCS2D01G412500.1	Wheat	nucleus	42.16	38.86
TraesCS2A01G415400.1	Wheat	nucleus	42.16	38.86
EES15365	Sorghum	nucleus	37.91	37.54
Zm00001d002750_P001	Maize	nucleus	41.18	36.63
Zm00001d026186_P001	Maize	nucleus	41.18	36.42
TraesCS7A01G251700.1	Wheat	nucleus	40.2	34.45
EES11224	Sorghum	nucleus	42.48	34.39
TraesCS7B01G139400.1	Wheat	nucleus	39.22	33.8
GSMUA_Achr1P01660_001	Banana	nucleus	33.99	32.3
KRH14648	Soybean	extracellular, golgi	22.55	20.29
KRH56248	Soybean	nucleus	27.45	16.34
KRH46196	Soybean	nucleus	19.28	16.08
KRH46194	Soybean	nucleus	23.86	15.97
KRH26778	Soybean	nucleus	24.84	15.93
KRH22574	Soybean	nucleus	24.84	15.87
KRH62709	Soybean	nucleus	26.14	15.69
KRH46191	Soybean	nucleus	23.2	15.4
KRH20589	Soybean	nucleus	26.47	15.2
KRH13249	Soybean	nucleus	26.14	15.01
KRG89766	Soybean	nucleus	25.49	14.97
KRH18640	Soybean	nucleus	25.49	14.61
KRG98748	Soybean	nucleus	23.86	13.8

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100793689	MapMan:15.5.2.1	EMBL:ACUP02005375	EnsemblPlantsGene:GLYMA_09G001500	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7LB18	EnsemblPlants:KRH36402	ProteinID:KRH36402
ProteinID:KRH36402.1	InterPro:Myb_dom	PFAM:PF00249	PFAM:PF13921	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF488	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000233919A	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:118035..120189

Molecular Weight (calculated)

35134.7 Da

IEP (calculated)

6.171

GRAVY (calculated)

-0.653

Length

306 amino acids

Sequence
(BLAST)

001: MEIRELEMIK KGPWSSEEDE VLLRHVSKYG PREWSSIRSK GLLPRTGKSC RLRWVNKLRP NLKTGCKFTA EEERLVIELQ AQYGNKWAKI ATYLQGRTDN
101: DVKNFWSSRR KRLERMLQKP PASKPKKNKG KAHLNQVQQV EEMVPPCSSN QVEEILSYAT SYMGNTLVFE MINLQDLIKP NYQQLENDYL SAVEVDATPL
201: HTVPSFESSS GYNFPLLPEP EPLLDFPLFP ECQDLVPEPF DPNFVYGFEE KKCLQCACSS SQKLGTRLPT FGLEGNSQSA SSNGFFKDFP SEIFEYFEHI
301: PTSSDQ

Best Arabidopsis Sequence Match ( AT3G60460.1 )
(BLAST)

001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP

Arabidopsis Description

DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.