CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18640	Soybean	nucleus	86.18	84.08
VIT_06s0009g02480.t01	Wine grape	nucleus	49.9	49.62
Solyc06g073640.2.1	Tomato	nucleus	43.19	44.64
PGSC0003DMT400015156	Potato	nucleus	42.8	44.42
PGSC0003DMT400058426	Potato	nucleus	40.69	40.54
KRH13249	Soybean	nucleus	41.27	40.34
KRH20589	Soybean	nucleus	40.69	39.77
Solyc01g009070.2.1	Tomato	nucleus	40.5	39.29
KRH62709	Soybean	nucleus	38.39	39.22
KRH56248	Soybean	nucleus	38.58	39.11
PGSC0003DMT400070549	Potato	nucleus	33.59	36.08
AT2G26960.1	Thale cress	nucleus	28.41	34.66
CDX83247	Canola	nucleus	28.79	34.48
CDY38535	Canola	nucleus	28.41	34.26
Bra000531.1-P	Field mustard	nucleus	28.6	34.25
Zm00001d033075_P001	Maize	nucleus	23.61	33.06
HORVU7Hr1G105450.1	Barley	nucleus	20.92	32.83
KRH14648	Soybean	extracellular, golgi	21.11	32.35
Solyc11g072060.1.1	Tomato	nucleus	31.86	30.74
AT2G26950.1	Thale cress	cytosol	22.26	30.37
HORVU7Hr1G105520.2	Barley	nucleus	22.65	30.26
KRH46196	Soybean	nucleus	21.31	30.25
TraesCS7B01G357900.1	Wheat	nucleus	22.84	29.75
TraesCS7D01G446700.1	Wheat	nucleus	22.84	29.75
TraesCS4A01G467100.1	Wheat	nucleus	16.12	29.68
KRH46194	Soybean	nucleus	25.53	29.1
KRH46191	Soybean	nucleus	25.72	29.07
HORVU7Hr1G027370.1	Barley	nucleus	23.8	29.04
EER90224	Sorghum	nucleus	23.8	28.97
Zm00001d014364_P002	Maize	nucleus	22.26	28.86
KRH48761	Soybean	nucleus	17.08	28.71
KRG98748	Soybean	nucleus	28.79	28.36
TraesCS7B01G031000.1	Wheat	nucleus	22.84	28.2
TraesCS7D01G130100.1	Wheat	nucleus	23.03	28.17
Zm00001d013801_P001	Maize	nucleus	24.76	28.1
KXG38121	Sorghum	nucleus	24.38	27.79
KRH26778	Soybean	nucleus	25.34	27.67
KRH66578	Soybean	nucleus	16.51	27.65
TraesCS6D01G126900.1	Wheat	nucleus	21.11	27.57
HORVU6Hr1G026450.1	Barley	nucleus	21.11	27.5
CDX71481	Canola	nucleus	29.94	27.37
KRH22574	Soybean	nucleus	25.14	27.35
Os06t0679400-01	Rice	nucleus	23.42	27.29
KRH27535	Soybean	nucleus	14.97	25.91
KRH36402	Soybean	nucleus	14.97	25.49
Zm00001d036577_P001	Maize	nucleus	22.07	22.5
Os03t0578900-00	Rice	nucleus	22.26	21.97

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100818609	MapMan:15.5.2.1	EMBL:ACUP02012272	EnsemblPlantsGene:GLYMA_20G047600	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7N1M2	EnsemblPlants:KRG89766	ProteinID:KRG89766
ProteinID:KRG89766.1	EMBL:MF288582	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF475	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000295F423	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:8976402..8981967

Molecular Weight (calculated)

57989.5 Da

IEP (calculated)

5.360

GRAVY (calculated)

-0.695

Length

521 amino acids

Sequence
(BLAST)

001: MSSVTSGGDN RKISKGRRSS SLEEEAGVGG NIRGESPLKK GPWTAAEDAI LVEYAKKHGQ GNWNAVHKYS GLARCGKSCR LRWANHLRPD LKKGEFTAEE
101: ENRILELHAK MGNKWARMAA ELPGRTDNEI KNYWNTRIKR MQRAGLPIYP EELCQRILNC NQESQNISIL SNEASQHGDL SQTDFDIPDV EFKIFKFRHG
201: LSHGQSIFDM PESSLFDQSS DSSHSYNLFP TMRPTKRPRE SEMLYDSFES CTINAAPLFD QYDNYTSEKI SDHPRLSLPR DPVLNTNDQF NGDNLTGSHA
301: ALNGNASSSV PMFRAMKLEL PSLQYPETQH GSWGTPTSPL PSLESVDTLI QSPVVEPILL DPISPQSSGL LEAIVHNSKS LKGSNNDLLL QETIGTTNEV
401: AKSSTLNHSF QTKWYELGEP NSPFGQSAAS VLIEYTPVSM CSVDGPQSIE TTQDHDDKHE ALTTQFPDSS RKKKNILKQM DYTQPDALLD LGWFGNSTEY
501: GSDQSVLQDA LSALLGEDCQ R

Best Arabidopsis Sequence Match ( AT3G11440.3 )
(BLAST)

001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL

Arabidopsis Description

ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.