Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g072060.1.1 | Tomato | nucleus | 84.95 | 76.3 |
| PGSC0003DMT400015156 | Potato | nucleus | 51.96 | 50.2 |
| PGSC0003DMT400058426 | Potato | nucleus | 47.42 | 43.98 |
| VIT_06s0009g02480.t01 | Wine grape | nucleus | 39.38 | 36.45 |
| KRG89766 | Soybean | nucleus | 36.08 | 33.59 |
| KRH18640 | Soybean | nucleus | 36.08 | 32.77 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 20.62 | 30.12 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 17.11 | 29.33 |
| Bra000531.1-P | Field mustard | nucleus | 25.57 | 28.51 |
| CDX83247 | Canola | nucleus | 25.57 | 28.51 |
| CDY38535 | Canola | nucleus | 25.36 | 28.47 |
| AT2G26950.1 | Thale cress | cytosol | 21.86 | 27.75 |
| AT2G26960.1 | Thale cress | nucleus | 24.33 | 27.63 |
| Zm00001d033075_P001 | Maize | nucleus | 21.03 | 27.42 |
| PGSC0003DMT400074486 | Potato | nucleus | 26.19 | 26.24 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 21.03 | 26.15 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 21.44 | 26.0 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 21.44 | 26.0 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 22.27 | 25.29 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 21.86 | 24.88 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 21.65 | 24.88 |
| PGSC0003DMT400036086 | Potato | nucleus | 24.33 | 24.79 |
| PGSC0003DMT400066066 | Potato | nucleus | 15.46 | 24.51 |
| Zm00001d014364_P002 | Maize | nucleus | 20.21 | 24.38 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 20.0 | 24.31 |
| EER90224 | Sorghum | nucleus | 21.44 | 24.3 |
| KXG38121 | Sorghum | nucleus | 22.47 | 23.85 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 19.59 | 23.75 |
| Zm00001d013801_P001 | Maize | nucleus | 22.27 | 23.53 |
| Os06t0679400-01 | Rice | nucleus | 21.24 | 23.04 |
| CDX71481 | Canola | nucleus | 25.15 | 21.4 |
| Zm00001d036577_P001 | Maize | nucleus | 20.41 | 19.37 |
| Os03t0578900-00 | Rice | nucleus | 21.03 | 19.32 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102587763 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1CMB7 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400027418 | PGSC:PGSC0003DMG400027418 | EnsemblPlants:PGSC0003DMT400070549 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF540 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000296F509 | RefSeq:XP_006340345.1 | SEG:seg |
Description
GAMYB-like2 [Source:PGSC_GENE;Acc:PGSC0003DMG400027418]
Coordinates
chr11:+:43644994..43648125
Molecular Weight (calculated)
53911.1 Da
IEP (calculated)
5.682
GRAVY (calculated)
-0.739
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MCMTTECVDR MTSEVGIDST SVKEANAGRN IREGSPLKKG PWIKAEDAIL MDYVAKYGEG NWSSVHRRTG LARCGKSCRL RWANHLKPDL KKGAFTQEEE
101: ELIIEMHAKI GNKWARMAAE FPGRTDNDIK NFWNTRLKRQ RRAEKHMLPL GVFFQEFSED KQNKELATSS SANSDPHLLP INNVEIPTAE NRNFEPSQQL
201: YPPGLLNIGF SSFLDTPATS LRDQGLNSSW NTHSVRSTVH SSKRIRGSEA WFSDQNVDLS QAHHQYQNDG SLFTQSLGFS SLYTRNLTSN YHPSSAGDIP
301: GIHASSSEPK LKGKLELPSF QTPMTSWDSP SSVPSIESSN TFIQSPPNEY TDSYSLSPQS SDLLHAILYG SQTPNASRNN SHQETSRDAG PDSCPVLQEI
401: QWGTNPDAIT PSGHTITSVF SEYTPSSGGS LEDHQSIAPL MGCNINQEMA NFTPTAGNDD TSNHDLFSET DMYFSSTDWA HDKME
101: ELIIEMHAKI GNKWARMAAE FPGRTDNDIK NFWNTRLKRQ RRAEKHMLPL GVFFQEFSED KQNKELATSS SANSDPHLLP INNVEIPTAE NRNFEPSQQL
201: YPPGLLNIGF SSFLDTPATS LRDQGLNSSW NTHSVRSTVH SSKRIRGSEA WFSDQNVDLS QAHHQYQNDG SLFTQSLGFS SLYTRNLTSN YHPSSAGDIP
301: GIHASSSEPK LKGKLELPSF QTPMTSWDSP SSVPSIESSN TFIQSPPNEY TDSYSLSPQS SDLLHAILYG SQTPNASRNN SHQETSRDAG PDSCPVLQEI
401: QWGTNPDAIT PSGHTITSVF SEYTPSSGGS LEDHQSIAPL MGCNINQEMA NFTPTAGNDD TSNHDLFSET DMYFSSTDWA HDKME
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.