Factsheet for Os03t0578900-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033075_P001	Maize	nucleus	47.54	67.47
TraesCS7A01G130700.1	Wheat	nucleus	49.24	61.47
HORVU7Hr1G027370.1	Barley	nucleus	49.62	61.36
TraesCS7D01G130100.1	Wheat	nucleus	49.05	60.8
TraesCS7B01G031000.1	Wheat	nucleus	48.3	60.43
KXG38121	Sorghum	nucleus	49.43	57.11
Zm00001d013801_P001	Maize	nucleus	46.78	53.81
CDY72198	Canola	nucleus	17.42	45.32
CDY69320	Canola	nucleus	17.42	45.32
Os06t0118150-00	Rice	nucleus	6.63	35.0
Os06t0605750-00	Rice	nucleus	11.17	34.5
GSMUA_Achr4P23690_001	Banana	nucleus	23.86	34.24
GSMUA_Achr7P00280_001	Banana	nucleus	20.83	33.74
KRH46196	Soybean	nucleus	19.89	28.61
Bra021791.1-P	Field mustard	nucleus	21.02	28.61
AT4G26930.1	Thale cress	nucleus	20.64	28.02
KRH14648	Soybean	extracellular, golgi	17.99	27.94
CDY20794	Canola	nucleus	21.59	27.74
CDY19890	Canola	nucleus	21.97	27.04
CDY67258	Canola	nucleus	21.97	26.98
VIT_12s0059g00700.t01	Wine grape	nucleus	21.4	26.53
KRH46194	Soybean	nucleus	22.73	26.26
Os06t0679400-01	Rice	nucleus	22.16	26.17
GSMUA_Achr2P13930_001	Banana	nucleus	16.29	26.14
PGSC0003DMT400015156	Potato	nucleus	24.81	26.1
Solyc06g073640.2.1	Tomato	nucleus	24.62	25.79
CDX83247	Canola	nucleus	21.02	25.52
CDY15321	Canola	nucleus	21.59	25.45
PGSC0003DMT400036086	Potato	nucleus	22.92	25.42
KRH56248	Soybean	nucleus	24.62	25.29
Bra000531.1-P	Field mustard	nucleus	20.83	25.29
CDY38535	Canola	nucleus	20.64	25.23
CDY19141	Canola	nucleus	21.21	25.23
KRH46191	Soybean	nucleus	21.97	25.16
VIT_19s0090g00590.t01	Wine grape	nucleus	21.97	25.0
CDY08526	Canola	nucleus	23.67	24.9
Bra002042.1-P	Field mustard	nucleus	22.16	24.89
CDY56849	Canola	nucleus	23.67	24.85
CDY66700	Canola	nucleus	20.83	24.77
CDY66041	Canola	nucleus	22.54	24.74
PGSC0003DMT400058426	Potato	nucleus	24.43	24.67
AT2G26960.1	Thale cress	nucleus	19.89	24.59
KRH62709	Soybean	nucleus	23.67	24.51
KRH20589	Soybean	nucleus	24.62	24.39
Solyc07g052300.2.1	Tomato	nucleus	22.35	24.28
GSMUA_Achr4P27730_001	Banana	nucleus	16.29	24.23
KRH13249	Soybean	nucleus	24.43	24.2
Bra034842.1-P	Field mustard	nucleus	23.67	24.18
PGSC0003DMT400074486	Potato	nucleus	22.16	24.17
AT5G55020.1	Thale cress	nucleus	23.67	23.9
Os05t0490600-00	Rice	nucleus	17.8	23.86
CDY68663	Canola	nucleus	20.64	23.85
VIT_06s0009g02480.t01	Wine grape	nucleus	23.48	23.66
Solyc01g009070.2.1	Tomato	nucleus	24.05	23.65
Bra022888.1-P	Field mustard	nucleus	20.45	23.63
KRG98748	Soybean	nucleus	23.67	23.63
Bra005597.1-P	Field mustard	nucleus	21.4	23.59
CDY48264	Canola	nucleus	21.4	23.59
CDY12203	Canola	nucleus	21.4	23.49
AT2G32460.1	Thale cress	nucleus	21.78	23.47
Os01t0812000-02	Rice	nucleus	24.24	23.15
AT5G06100.4	Thale cress	nucleus	22.73	23.08
Bra028997.1-P	Field mustard	nucleus	23.86	22.78
CDY43016	Canola	nucleus	23.86	22.74
VIT_13s0067g01630.t01	Wine grape	nucleus	23.86	22.54
Bra035547.1-P	Field mustard	nucleus	23.11	22.51
CDY61426	Canola	nucleus	23.67	22.44
Bra002938.1-P	Field mustard	nucleus	24.43	22.43
KRH26778	Soybean	nucleus	20.27	22.43
KRH22574	Soybean	nucleus	20.27	22.34
KRH18640	Soybean	nucleus	22.54	22.28
KRG89766	Soybean	nucleus	21.97	22.26
AT3G11440.1	Thale cress	nucleus	22.92	21.88
AT2G26950.1	Thale cress	cytosol	15.72	21.73
PGSC0003DMT400070549	Potato	nucleus	19.32	21.03
Solyc12g005890.1.1	Tomato	nucleus	14.77	19.26
Solyc11g072060.1.1	Tomato	nucleus	19.7	19.26
CDX71481	Canola	nucleus	20.08	18.6
Os06t0605600-01	Rice	cytosol, mitochondrion, nucleus	7.39	11.37

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	UniProt:A0A0P0W0B3	ProteinID:BAS85046.1	ncoils:Coil	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os03g0578900	EnsemblPlants:Os03t0578900-00
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF916	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000393C4EF	SEG:seg	:	:	:

Description

GAMYB-LIKE 2Similar to MYB1. (Os03t0578900-00)

Coordinates

chr3:+:21212377..21214189

Molecular Weight (calculated)

56432.4 Da

IEP (calculated)

8.045

GRAVY (calculated)

-0.564

Length

528 amino acids

Sequence
(BLAST)

001: ALHPHTTHHS ILSIFQPLFS RSTLPYISPS SPPHTPDASI APKVQELLAS DASSPYIALW RAKRENNPDK RDSHVLPLAL TPTTTAPHCL SPAKTTCNPH
101: KTKKRQQPAS LPPPILATSP LKSPPPPPLA LHLSFSTHTT PAPAPAPASS EEEKEVVATA ATGERRHEEA TAGREEQEEE EEEEEAPVVL KKGPWTTAED
201: AVLVQHVRQH GEGNWNAVQR MTGLLRCGKS CRLRWTNHLR PNLKKGSFSP DEELLIAQLH AQLGNKWARM ASHLPGRTDN EIKNYWNTRT KRRQRAGLPV
301: YPPDVQLHLA FAKRCRYDDF SSPLSSPQQS AGSNVLSMDA ADAAGAASSG YTSARPPPLD LAGQLAMGSR PVQLLAATPF SAPSSPWGKP FARNAQFFQF
401: PHSSPVSPTT PTGPVQVHPV TPELSLGYGL HAGDRARLPP VSPSPGARAE LPSSQLRPSM APTTAAAAAT GGLVGGALQD HPNAASLEAM LQELHDAIKI
501: EPPAPPENRG TEEEGGGGGG NLRGVSGE

Best Arabidopsis Sequence Match ( AT2G32460.2 )
(BLAST)

001: MVGRGLKKGP WTTTEDAILT EYVRKHGEGN WNAVQKNSGL LRCGKSCRLR WANHLRPNLK KGSFTPDEEK IIIDLHAKLG NKWARMASQL PGRTDNEIKN
101: YWNTRMKRRQ RAGLPLYPHE IQHQGIDIDD EFEFDLTSFQ FQNQDLDHNH QNMIQYTNSS NTSSSSSSFS SSSSQPSKRL RPDPLVSTNP GLNPIPDSSM
201: DFQMFSLYNN SLENDNNQFG FSVPLSSSSS SNEVCNPNHI LEYISENSDT RNTNKKDIDA MSYSSLLMGD LEIRSSSFPL GLDNSVLELP SNQRPTHSFS
301: SSPIIDNGVH LEPPSGNSGL LDALLEESQA LSRGGLFKDV RVSSSDLCEV QDKRVKMDFE NLLIDHLNSS NHSSLGANPN IHNKYNEPTM VKVTVDDDDE
401: LLTSLLNNFP STTTPLPDWY RVTEMQNEAS YLAPPSGILM GNHQGNGRVE PPTVPPSSSV DPMASLGSCY WSNMPSIC

Arabidopsis Description

MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.