Factsheet for Os06t0605750-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G090120.1	Barley	mitochondrion, nucleus	53.8	19.49
TraesCS7B01G278400.1	Wheat	nucleus	51.46	18.07
TraesCS7A01G377100.1	Wheat	nucleus	50.29	17.62
Zm00001d046518_P001	Maize	nucleus	40.94	17.46
Zm00001d046517_P001	Maize	nucleus	40.94	17.46
Zm00001d046519_P001	Maize	nucleus	40.35	17.21
TraesCS7D01G373400.1	Wheat	mitochondrion, nucleus	51.46	17.02
KXG20323	Sorghum	nucleus	46.2	16.74
Os05t0490600-00	Rice	nucleus	36.26	15.74
Zm00001d036551_P001	Maize	nucleus	39.18	15.23
Os06t0118150-00	Rice	nucleus	8.77	15.0
Os06t0679400-01	Rice	nucleus	37.43	14.32
Os01t0812000-02	Rice	nucleus	44.44	13.74
Zm00001d000361_P001	Maize	nucleus	39.77	13.15
Os03t0578900-00	Rice	nucleus	34.5	11.17
Zm00001d036883_P001	Maize	nucleus	21.05	7.78
Os06t0605600-01	Rice	cytosol, mitochondrion, nucleus	3.51	1.75

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	UniProt:A0A0P0WYS8	ProteinID:BAS98524.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:IPR017930	InterPro:Myb-like_dom
InterPro:Myb_dom	EnsemblPlantsGene:Os06g0605750	EnsemblPlants:Os06t0605750-00	PFAM:PF00249	PFscan:PS50090	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF475	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000393BD43
SEG:seg	:	:	:	:	:

Description

Similar to GAMYB-like1. (Os06t0605750-00)

Coordinates

chr6:-:24008176..24009799

Molecular Weight (calculated)

18891.1 Da

IEP (calculated)

7.047

GRAVY (calculated)

-1.103

Length

171 amino acids

Sequence
(BLAST)

001: MRMEGSSPME EEEEAARLAG SQGESPAMLH PNGDGDGDGG DDEGDASGGE EEQGGVARAG VRRRGGGGRV RVRGRIPLKK GPWTPDEDKR LREYVEAHGE
101: GNWNRVQRNA GLNRCGKSCR LRWANHLKPD LKKGPFSKEE EEMIIKLHLW LGNKWAKMAN SGQHYWCDVS A

Best Arabidopsis Sequence Match ( AT5G55020.1 )
(BLAST)

001: MIMYGGGGAG KDGGSTNHLS DGGVILKKGP WTAAEDEILA AYVRENGEGN WNAVQKNTGL ARCGKSCRLR WANHLRPNLK KGSFTGDEER LIIQLHAQLG
101: NKWARMAAQL PGRTDNEIKN YWNTRLKRLL RQGLPLYPPD IIPNHQLHPH PHHQQQQQHN HHHHHHQQQQ QHQQMYFQPQ SSQRNTPSSS PLPSPTPANA
201: KSSSSFTFHT TTANLLHPLS PHTPNTPSQL SSTPPPPPLS SPLCSPRNNQ YPTLPLFALP RSQINNNNNG NFTFPRPPPL LQPPSSLFAK RYNNANTPLN
301: CINRVSTAPF SPVSRDSYTS FLTLPYPSPT AQTATYHNTN NPYSSSPSFS LNPSSSSYPT STSSPSFLHS HYTPSSTSFH TNPVYSMKQE QLPSNQIPQI
401: DGFNNVNNFT DNERQNHNLN SSGAHRRSSS CSLLEDVFEE AEALASGGRG RPPKRRQLTA SLPNHNNNTN NNDNFFSVSF GHYDSSDNLC SLQGKTKTTY
501: NTSNLNYSSL QVKCKMFMIK TQI

Arabidopsis Description

ATMYB120Transcription factor MYB120 [Source:UniProtKB/Swiss-Prot;Acc:Q94FL7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.