Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d036551_P001 | Maize | nucleus | 78.53 | 92.27 |
| Zm00001d036883_P001 | Maize | nucleus | 40.43 | 45.14 |
| Os06t0605750-00 | Rice | nucleus | 13.15 | 39.77 |
| Zm00001d046518_P001 | Maize | nucleus | 27.47 | 35.41 |
| Zm00001d046517_P001 | Maize | nucleus | 27.47 | 35.41 |
| Zm00001d046519_P001 | Maize | nucleus | 27.27 | 35.16 |
| KXG20323 | Sorghum | nucleus | 29.4 | 32.2 |
| Zm00001d033075_P001 | Maize | nucleus | 19.15 | 26.61 |
| HORVU7Hr1G090120.1 | Barley | mitochondrion, nucleus | 23.79 | 26.06 |
| TraesCS7A01G377100.1 | Wheat | nucleus | 23.98 | 25.41 |
| TraesCS7B01G278400.1 | Wheat | nucleus | 23.21 | 24.64 |
| TraesCS7D01G373400.1 | Wheat | mitochondrion, nucleus | 24.18 | 24.18 |
| Zm00001d013801_P001 | Maize | nucleus | 21.08 | 23.75 |
| Zm00001d012544_P001 | Maize | nucleus | 22.05 | 23.17 |
| Zm00001d014364_P002 | Maize | nucleus | 17.99 | 23.13 |
| Zm00001d031515_P001 | Maize | nucleus | 12.57 | 22.11 |
| Zm00001d002750_P001 | Maize | nucleus | 14.7 | 22.09 |
| Zm00001d043131_P002 | Maize | nucleus | 23.79 | 22.0 |
| Zm00001d026186_P001 | Maize | nucleus | 14.51 | 21.68 |
| Zm00001d036577_P001 | Maize | nucleus | 18.57 | 18.79 |
| Os06t0605600-01 | Rice | cytosol, mitochondrion, nucleus | 11.03 | 16.62 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100383604 | MapMan:15.5.2.1 | EMBL:BT067757 | UniProt:C0PHI8 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF475 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000195CD9B | EnsemblPlantsGene:Zm00001d000361 | EnsemblPlants:Zm00001d000361_P001 | EnsemblPlants:Zm00001d000361_T001 | SEG:seg |
Description
MYB-transcription factor 115Transcription factor MYB104
Coordinates
chrB73V4_ctg115:-:46043..53621
Molecular Weight (calculated)
58094.7 Da
IEP (calculated)
4.876
GRAVY (calculated)
-0.737
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQLPSKFKN KMMVVRVDEN PAPDGENSPL DDEYVSADDE HVDNEDKETD SIGDYENPSG APQLKKGPWS PEEDKRLKDY VEVHGAGNWN KVQKNAMLNR
101: CGKSCRLRWT NHLRPDLKKD PFDAEEEEKI IKLYIRWGPK WSMMASYLPG RTDNEIKNFW NTRKRRKQRC GSPLHPEYML SQLSHKDMDC ETPGESHGKK
201: RSNECSKEKV VDVQELVDEL IVFEHLDYGK DTVFPTRPLK CHASTSSVQI PGAIEKTFCP TDLNYVMTKN QSVHVGSAIG SGYPVYGGRL STSGTIFGSI
301: QTEIPSIQSS SYSPSNDWLA QCPSACIEQR IPMECNTISQ SKAYLMMHSS SAFCAPEHEA CSETQAPDLC SGSDAVFDPS QCYPVASFSD LGISDTLLTK
401: GLLNDIALAS LLNVNLKDQS HINRQEPTND TSLGGASFLN ANLKDQSHLN WQEHMNETSP VAGLLNANLE EQSHLNWQEP KNESSPEAGF LNANLEEQSH
501: LNWPLQECEP WIERQMF
101: CGKSCRLRWT NHLRPDLKKD PFDAEEEEKI IKLYIRWGPK WSMMASYLPG RTDNEIKNFW NTRKRRKQRC GSPLHPEYML SQLSHKDMDC ETPGESHGKK
201: RSNECSKEKV VDVQELVDEL IVFEHLDYGK DTVFPTRPLK CHASTSSVQI PGAIEKTFCP TDLNYVMTKN QSVHVGSAIG SGYPVYGGRL STSGTIFGSI
301: QTEIPSIQSS SYSPSNDWLA QCPSACIEQR IPMECNTISQ SKAYLMMHSS SAFCAPEHEA CSETQAPDLC SGSDAVFDPS QCYPVASFSD LGISDTLLTK
401: GLLNDIALAS LLNVNLKDQS HINRQEPTND TSLGGASFLN ANLKDQSHLN WQEHMNETSP VAGLLNANLE EQSHLNWQEP KNESSPEAGF LNANLEEQSH
501: LNWPLQECEP WIERQMF
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.