Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002750_P001 | Maize | nucleus | 80.64 | 81.1 |
| EES11224 | Sorghum | nucleus | 86.42 | 79.1 |
| TraesCS2A01G415400.1 | Wheat | nucleus | 59.54 | 62.05 |
| TraesCS2D01G412500.1 | Wheat | nucleus | 59.25 | 61.75 |
| TraesCS2B01G434400.1 | Wheat | nucleus | 58.67 | 61.33 |
| Os06t0118150-00 | Rice | nucleus | 17.34 | 60.0 |
| Zm00001d031515_P001 | Maize | nucleus | 38.15 | 44.9 |
| KRH27535 | Soybean | nucleus | 35.84 | 41.2 |
| KRH36402 | Soybean | nucleus | 36.42 | 41.18 |
| VIT_15s0021g02040.t01 | Wine grape | nucleus | 36.42 | 40.78 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 36.99 | 39.75 |
| Bra007536.1-P | Field mustard | nucleus | 30.64 | 39.41 |
| KRH48761 | Soybean | nucleus | 35.26 | 39.35 |
| CDX71809 | Canola | nucleus | 30.92 | 39.34 |
| KRH66578 | Soybean | nucleus | 35.26 | 39.23 |
| CDY41164 | Canola | nucleus | 30.64 | 38.97 |
| Solyc10g019260.1.1 | Tomato | nucleus | 34.1 | 38.82 |
| PGSC0003DMT400066066 | Potato | nucleus | 33.81 | 38.24 |
| Bra003413.1-P | Field mustard | nucleus | 31.79 | 37.8 |
| AT3G60460.1 | Thale cress | nucleus | 32.37 | 37.33 |
| Solyc01g090530.1.1 | Tomato | nucleus | 34.39 | 37.3 |
| CDX67827 | Canola | nucleus | 32.66 | 37.17 |
| CDY64759 | Canola | nucleus | 32.66 | 37.05 |
| Zm00001d033075_P001 | Maize | nucleus | 21.68 | 20.16 |
| Zm00001d014364_P002 | Maize | nucleus | 21.97 | 18.91 |
| Zm00001d013801_P001 | Maize | nucleus | 24.57 | 18.52 |
| Zm00001d036551_P001 | Maize | nucleus | 20.81 | 16.36 |
| Zm00001d046517_P001 | Maize | nucleus | 18.79 | 16.21 |
| Zm00001d046518_P001 | Maize | nucleus | 18.79 | 16.21 |
| Zm00001d046519_P001 | Maize | nucleus | 18.79 | 16.21 |
| Zm00001d012544_P001 | Maize | nucleus | 22.54 | 15.85 |
| Zm00001d043131_P002 | Maize | nucleus | 24.57 | 15.21 |
| Zm00001d000361_P001 | Maize | nucleus | 21.68 | 14.51 |
| Zm00001d036577_P001 | Maize | nucleus | 21.39 | 14.48 |
| Zm00001d036883_P001 | Maize | nucleus | 13.29 | 9.94 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A1D6JD85 | ProteinID:AQK45788.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 |
| PFAM:PF13921 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF488 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000844B5B5 | EnsemblPlantsGene:Zm00001d026186 | EnsemblPlants:Zm00001d026186_P001 | EnsemblPlants:Zm00001d026186_T001 | SEG:seg |
Description
MYB-transcription factor 68Putative MYB DNA-binding domain superfamily protein
Coordinates
chr10:-:140542121..140544170
Molecular Weight (calculated)
37139.8 Da
IEP (calculated)
8.813
GRAVY (calculated)
-0.382
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MARAPGGARR RGGGSGRRGQ ADGGQAVRKG HWTAEEDAVL LRHVLVHGPR DWSSIRSKGF LPRTGKSCRL RWVNKLRPDL KTGCKFSAEE ERVVLELQAQ
101: FGNKWARIST YLPGRTDNDV KNFWSTRQKR IARLLGTPPR GRSSRSRSRS AKGKAPVVAS SLESRPATVV PCLDEVPLEG SSSGVVHPCS AATPFMETRS
201: VSAALAPYDW AGSGLFSFDD GALPLACNSH ACSSSNAAAL LPFDQPPYPL LDVQVQGVPA GWNWNMAPGF ANAGATDHLA YQELLPLTQA APMVLPFFDA
301: EYPLGGVKAE LPDAAPDNFD DLPPDVFDSF DQPPPPVSPP ATSSGF
101: FGNKWARIST YLPGRTDNDV KNFWSTRQKR IARLLGTPPR GRSSRSRSRS AKGKAPVVAS SLESRPATVV PCLDEVPLEG SSSGVVHPCS AATPFMETRS
201: VSAALAPYDW AGSGLFSFDD GALPLACNSH ACSSSNAAAL LPFDQPPYPL LDVQVQGVPA GWNWNMAPGF ANAGATDHLA YQELLPLTQA APMVLPFFDA
301: EYPLGGVKAE LPDAAPDNFD DLPPDVFDSF DQPPPPVSPP ATSSGF
001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
Arabidopsis Description
DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.