Factsheet for Zm00001d036551_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000361_P001	Maize	nucleus	92.27	78.53
Zm00001d036883_P001	Maize	nucleus	48.18	45.79
Os06t0605750-00	Rice	nucleus	15.23	39.18
Zm00001d046518_P001	Maize	nucleus	30.68	33.67
Zm00001d046517_P001	Maize	nucleus	30.68	33.67
Zm00001d046519_P001	Maize	nucleus	30.45	33.42
KXG20323	Sorghum	nucleus	32.95	30.72
Zm00001d033075_P001	Maize	nucleus	22.5	26.61
HORVU7Hr1G090120.1	Barley	mitochondrion, nucleus	26.82	25.0
TraesCS7A01G377100.1	Wheat	nucleus	27.27	24.59
TraesCS7B01G278400.1	Wheat	nucleus	27.05	24.44
TraesCS7D01G373400.1	Wheat	mitochondrion, nucleus	27.5	23.4
Zm00001d014364_P002	Maize	nucleus	20.68	22.64
Zm00001d031515_P001	Maize	nucleus	15.0	22.45
Zm00001d013801_P001	Maize	nucleus	23.41	22.44
Zm00001d012544_P001	Maize	nucleus	25.0	22.36
Zm00001d002750_P001	Maize	nucleus	16.82	21.51
Zm00001d026186_P001	Maize	nucleus	16.36	20.81
Zm00001d043131_P002	Maize	nucleus	26.14	20.57
Zm00001d036577_P001	Maize	nucleus	21.82	18.79
Os06t0605600-01	Rice	cytosol, mitochondrion, nucleus	11.82	15.16

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100273858	MapMan:15.5.2.1	ProteinID:AQK81348.1	UniProt:B4FXU8	EMBL:BT041936
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930
EMBL:KJ726899	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF475
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00017B81DC	EnsemblPlantsGene:Zm00001d036551	EnsemblPlants:Zm00001d036551_P001
EnsemblPlants:Zm00001d036551_T001	SEG:seg	:	:	:	:

Description

MYB-transcription factor 59Transcription factor MYB104

Coordinates

chr6:-:91831037..91834032

Molecular Weight (calculated)

49140.3 Da

IEP (calculated)

4.970

GRAVY (calculated)

-0.689

Length

440 amino acids

Sequence
(BLAST)

001: MTVVRVDENP APDGENSPLD DEYVSADDEH VDDEDKETDS IDDYENPSGT PQMKKGPWSP EEDKRLKDYV EVHGAGNWNK VQQNARLNRC GKSCRLRWTN
101: HLRPDLKKEP FNAEEEEKII KLHIRRGPKW SMMASYLPGR TDNEIKNFWN TRKRRKQRCG SPLYPEYMLS QVSHKDMDFE TLGESHGKKR SNECSKEKVV
201: DVQELVDELI VFEHLDYGKD IVFPIRPLKC HASTGSVQIS GDIRKTFCPT DLNYVMTKNQ SVPVGSAIGS GYPVYGGRLS TSGTIFGSIQ TEIPSIQSSS
301: YSPSNDWLAQ CPSACIEQRI PMECNTISQS KAYLMMHSSS AFCAPEHDAC SETQAPDLCS GSDVVFDPSQ CYPVASFSDL GISDTPLTSG FLNDITLASL
401: LNVNLKDLSH LNRQEPTNDT SLGGASLLNA NLKDQSHLSQ

Best Arabidopsis Sequence Match ( AT3G11440.1 )
(BLAST)

001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL

Arabidopsis Description

ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.