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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d036551_P001 Maize nucleus 45.79 48.18
Zm00001d000361_P001 Maize nucleus 45.14 40.43
Zm00001d046518_P001 Maize nucleus 19.65 22.69
Zm00001d046517_P001 Maize nucleus 19.65 22.69
KXG20323 Sorghum nucleus 22.68 22.25
Zm00001d046519_P001 Maize nucleus 19.22 22.19
Os06t0605750-00 Rice nucleus 7.78 21.05
Zm00001d033075_P001 Maize nucleus 15.98 19.89
HORVU7Hr1G090120.1 Barley mitochondrion, nucleus 17.93 17.58
TraesCS7A01G377100.1 Wheat nucleus 18.36 17.42
TraesCS7B01G278400.1 Wheat nucleus 17.93 17.04
TraesCS7D01G373400.1 Wheat mitochondrion, nucleus 18.36 16.44
Zm00001d013801_P001 Maize nucleus 15.98 16.12
Zm00001d031515_P001 Maize nucleus 9.72 15.31
Zm00001d014364_P002 Maize nucleus 12.96 14.93
Zm00001d012544_P001 Maize nucleus 15.77 14.84
Zm00001d043131_P002 Maize nucleus 16.63 13.77
Zm00001d002750_P001 Maize nucleus 9.94 13.37
Zm00001d026186_P001 Maize nucleus 9.94 13.29
Zm00001d036577_P001 Maize nucleus 13.61 12.33
Os06t0605600-01 Rice cytosol, mitochondrion, nucleus 8.86 11.95
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1UniProt:A0A1D6LS94ProteinID:AQK82321.1ncoils:CoilGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_dom
PFAM:PF00249PFscan:PS51294PANTHER:PTHR10641PANTHER:PTHR10641:SF918InterPro:SANT/MybSMART:SM00717
SUPFAM:SSF46689UniParc:UPI000843B188EnsemblPlantsGene:Zm00001d036883EnsemblPlants:Zm00001d036883_P001EnsemblPlants:Zm00001d036883_T001SEG:seg
Description
MYB-related-transcription factor 23Transcription factor MYB104
Coordinates
chr6:-:105560166..105566394
Molecular Weight (calculated)
51883.5 Da
IEP (calculated)
7.046
GRAVY (calculated)
-0.547
Length
463 amino acids
Sequence
(BLAST)
001: MVQQNVRLNR CGKRCCRWTN HLRPNLKKEP FNAEEEEKTI KFHIWWGSKW AMMASHLPGR TYNEIKNYWN TRNRRKQGCG SPLHLEYMLS QVSHKDMDCE
101: IPRESHGKKR SNECSKENVA DVQELVDELI VFEHLDYGKD IMFPTRPLKH HASTGSVQIP GDIGKTLNYV MTKNQSMPVG SAIGSGYPVY GGKLSTLGTI
201: FSSIQTEIPS IQSSSYSITF CAPEHEGCSE TQAPNLCSGS DVVFDPSQCY PVASFSDLGI PDTPLIAGFL NDIALLPGST DNEIKNYWNT RKRRKRRCGS
301: PLHPEYMLSQ VTHKDMDCET PGESHGKKRS NECSKEKVAD VQELVDELIV FEHLDYGKDI MFPTRPLKHH ASTGSVQIPG DIGKTLNYVM TKNQSMSVGS
401: AIGNGYPVYG GRLSTSGTIF SSIQMEIPSI QSSSYSPSND WFALCPSACI EQWIPMECDT ISQ
Best Arabidopsis Sequence Match ( AT3G11440.2 )
(BLAST)
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.