Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d036551_P001 | Maize | nucleus | 45.79 | 48.18 |
Zm00001d000361_P001 | Maize | nucleus | 45.14 | 40.43 |
Zm00001d046518_P001 | Maize | nucleus | 19.65 | 22.69 |
Zm00001d046517_P001 | Maize | nucleus | 19.65 | 22.69 |
KXG20323 | Sorghum | nucleus | 22.68 | 22.25 |
Zm00001d046519_P001 | Maize | nucleus | 19.22 | 22.19 |
Os06t0605750-00 | Rice | nucleus | 7.78 | 21.05 |
Zm00001d033075_P001 | Maize | nucleus | 15.98 | 19.89 |
HORVU7Hr1G090120.1 | Barley | mitochondrion, nucleus | 17.93 | 17.58 |
TraesCS7A01G377100.1 | Wheat | nucleus | 18.36 | 17.42 |
TraesCS7B01G278400.1 | Wheat | nucleus | 17.93 | 17.04 |
TraesCS7D01G373400.1 | Wheat | mitochondrion, nucleus | 18.36 | 16.44 |
Zm00001d013801_P001 | Maize | nucleus | 15.98 | 16.12 |
Zm00001d031515_P001 | Maize | nucleus | 9.72 | 15.31 |
Zm00001d014364_P002 | Maize | nucleus | 12.96 | 14.93 |
Zm00001d012544_P001 | Maize | nucleus | 15.77 | 14.84 |
Zm00001d043131_P002 | Maize | nucleus | 16.63 | 13.77 |
Zm00001d002750_P001 | Maize | nucleus | 9.94 | 13.37 |
Zm00001d026186_P001 | Maize | nucleus | 9.94 | 13.29 |
Zm00001d036577_P001 | Maize | nucleus | 13.61 | 12.33 |
Os06t0605600-01 | Rice | cytosol, mitochondrion, nucleus | 8.86 | 11.95 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A1D6LS94 | ProteinID:AQK82321.1 | ncoils:Coil | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF918 | InterPro:SANT/Myb | SMART:SM00717 |
SUPFAM:SSF46689 | UniParc:UPI000843B188 | EnsemblPlantsGene:Zm00001d036883 | EnsemblPlants:Zm00001d036883_P001 | EnsemblPlants:Zm00001d036883_T001 | SEG:seg |
Description
MYB-related-transcription factor 23Transcription factor MYB104
Coordinates
chr6:-:105560166..105566394
Molecular Weight (calculated)
51883.5 Da
IEP (calculated)
7.046
GRAVY (calculated)
-0.547
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQQNVRLNR CGKRCCRWTN HLRPNLKKEP FNAEEEEKTI KFHIWWGSKW AMMASHLPGR TYNEIKNYWN TRNRRKQGCG SPLHLEYMLS QVSHKDMDCE
101: IPRESHGKKR SNECSKENVA DVQELVDELI VFEHLDYGKD IMFPTRPLKH HASTGSVQIP GDIGKTLNYV MTKNQSMPVG SAIGSGYPVY GGKLSTLGTI
201: FSSIQTEIPS IQSSSYSITF CAPEHEGCSE TQAPNLCSGS DVVFDPSQCY PVASFSDLGI PDTPLIAGFL NDIALLPGST DNEIKNYWNT RKRRKRRCGS
301: PLHPEYMLSQ VTHKDMDCET PGESHGKKRS NECSKEKVAD VQELVDELIV FEHLDYGKDI MFPTRPLKHH ASTGSVQIPG DIGKTLNYVM TKNQSMSVGS
401: AIGNGYPVYG GRLSTSGTIF SSIQMEIPSI QSSSYSPSND WFALCPSACI EQWIPMECDT ISQ
101: IPRESHGKKR SNECSKENVA DVQELVDELI VFEHLDYGKD IMFPTRPLKH HASTGSVQIP GDIGKTLNYV MTKNQSMPVG SAIGSGYPVY GGKLSTLGTI
201: FSSIQTEIPS IQSSSYSITF CAPEHEGCSE TQAPNLCSGS DVVFDPSQCY PVASFSDLGI PDTPLIAGFL NDIALLPGST DNEIKNYWNT RKRRKRRCGS
301: PLHPEYMLSQ VTHKDMDCET PGESHGKKRS NECSKEKVAD VQELVDELIV FEHLDYGKDI MFPTRPLKHH ASTGSVQIPG DIGKTLNYVM TKNQSMSVGS
401: AIGNGYPVYG GRLSTSGTIF SSIQMEIPSI QSSSYSPSND WFALCPSACI EQWIPMECDT ISQ
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.