Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G377100.1 | Wheat | nucleus | 26.53 | 18.65 |
| KXG20323 | Sorghum | nucleus | 25.36 | 18.43 |
| TraesCS7B01G278400.1 | Wheat | nucleus | 25.66 | 18.07 |
| TraesCS7D01G373400.1 | Wheat | mitochondrion, nucleus | 26.82 | 17.8 |
| Zm00001d046517_P001 | Maize | nucleus | 20.7 | 17.71 |
| Zm00001d046518_P001 | Maize | nucleus | 20.7 | 17.71 |
| Zm00001d046519_P001 | Maize | nucleus | 20.7 | 17.71 |
| HORVU7Hr1G090120.1 | Barley | mitochondrion, nucleus | 22.45 | 16.31 |
| Os01t0812000-02 | Rice | nucleus | 21.57 | 13.38 |
| Os06t0118150-00 | Rice | nucleus | 3.79 | 13.0 |
| Zm00001d036551_P001 | Maize | nucleus | 15.16 | 11.82 |
| Zm00001d000361_P001 | Maize | nucleus | 16.62 | 11.03 |
| Os06t0679400-01 | Rice | nucleus | 13.12 | 10.07 |
| Os05t0490600-00 | Rice | nucleus | 10.2 | 8.88 |
| Zm00001d036883_P001 | Maize | nucleus | 11.95 | 8.86 |
| Os03t0578900-00 | Rice | nucleus | 11.37 | 7.39 |
| Os06t0605750-00 | Rice | nucleus | 1.75 | 3.51 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A0P0WYW1 | ProteinID:BAS98523.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | EnsemblPlantsGene:Os06g0605600 |
| EnsemblPlants:Os06t0605600-01 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF904 | UniParc:UPI0003939F58 | : | : |
Description
GAMYB-LIKE 1Similar to GAMYB-like1. (Os06t0605600-01)
Coordinates
chr6:-:24005166..24006559
Molecular Weight (calculated)
37865.3 Da
IEP (calculated)
4.201
GRAVY (calculated)
-0.595
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: KNFWNTRCKR IQRTGEPLYP KEFNHFKLTD LEVMNCESPD ESRAKKRTNE VLQGNGQSYK EVFFDNLDYS RPENYIRPNC VTPNSLPVDA TSPFGSAIAT
101: QDQSVPFGSA IVSGHPILDG NFSTSGTIQR PMNVELPSLQ YPNYDFNNNN AWSYHDPLGH PIDQVDFGSL RSEYLSPNNN GLLDALVHGG HGQGELANSQ
201: GSFDACFPRV QCNQVIQSNA FSLSSSFPII GDDLLENSCH AFVGINNNAS SLFLDSQPPP LVDPTFWRHD VSLEPNLPVY CQFNEELPPS NEQFAKDADD
301: AFGHGGLSDE TNLAAAGQGD EHDLEDPWAS MPGACDIPDF PSE
101: QDQSVPFGSA IVSGHPILDG NFSTSGTIQR PMNVELPSLQ YPNYDFNNNN AWSYHDPLGH PIDQVDFGSL RSEYLSPNNN GLLDALVHGG HGQGELANSQ
201: GSFDACFPRV QCNQVIQSNA FSLSSSFPII GDDLLENSCH AFVGINNNAS SLFLDSQPPP LVDPTFWRHD VSLEPNLPVY CQFNEELPPS NEQFAKDADD
301: AFGHGGLSDE TNLAAAGQGD EHDLEDPWAS MPGACDIPDF PSE
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.