Factsheet for Os05t0490600-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0605750-00	Rice	nucleus	15.74	36.26
Os06t0118150-00	Rice	nucleus	7.61	30.0
TraesCS1A01G308100.2	Wheat	nucleus	32.99	28.32
TraesCS1B01G318800.3	Wheat	nucleus	32.74	28.1
TraesCS1D01G307500.2	Wheat	nucleus	32.74	28.1
Os01t0812000-02	Rice	nucleus	35.79	25.5
HORVU0Hr1G001230.9	Barley	nucleus	31.98	25.45
HORVU1Hr1G068520.6	Barley	nucleus	31.98	25.45
Os06t0679400-01	Rice	nucleus	24.87	21.92
Os03t0578900-00	Rice	nucleus	23.86	17.8
Os06t0605600-01	Rice	cytosol, mitochondrion, nucleus	8.88	10.2

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4339167	ProteinID:BAF17816.1	ProteinID:BAS94657.1	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os05g0490600	EnsemblPlants:Os05t0490600-00
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF475	UniProt:Q0DH57	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00006028D6	RefSeq:XP_015639103.1	:	:

Description

myb transcription factor 5, transcription factor MYB5OSMYB5. (Os05t0490600-00)

Coordinates

chr5:-:24110841..24114828

Molecular Weight (calculated)

45135.6 Da

IEP (calculated)

5.015

GRAVY (calculated)

-0.786

Length

394 amino acids

Sequence
(BLAST)

001: MHESDSDPDS DRTHWYMSNS DDESFVDKDK DCRRSTVALL LKKGPWTSWE DSILEKYIKK HGERNWKLVQ KNTGLLRCGK SCRLRWMNHL RPNLKKGAFS
101: KEEENKIINL HRKMGNKWSR MAADLPGRTD NEIKNYWNTR IKKCKNNRSP LYPANVCNDA LNEDQHESAD PNVREKLTNN HLEDTTSMYS APQFSDASIS
201: NILDRRLASK DYDSIEDQRN QIEVVAKYEI PLPVLKTTNN DIFPSASIFA NHGISNGNLS ALSTTDALQM ELPLIQFDPN NQFVYSRAYA MHLTNFALLN
301: DQSEELLNDT DVLNYVVMKE ELSGGSLSPT INMPCEAHNS MAASNELVVP QYEGDAPPLQ DDFTSYFYLN DTNLSIFEDT NELFLENKLD TKGN

Best Arabidopsis Sequence Match ( AT5G06100.1 )
(BLAST)

001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C

Arabidopsis Description

MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.