Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G318800.3 | Wheat | nucleus | 97.82 | 97.82 |
| TraesCS1D01G307500.2 | Wheat | nucleus | 96.08 | 96.08 |
| HORVU1Hr1G068520.6 | Barley | nucleus | 90.2 | 83.64 |
| HORVU0Hr1G001230.9 | Barley | nucleus | 89.98 | 83.43 |
| TraesCS3A01G336500.1 | Wheat | nucleus | 44.23 | 34.64 |
| Os05t0490600-00 | Rice | nucleus | 28.32 | 32.99 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 18.3 | 29.68 |
| TraesCS7A01G130700.1 | Wheat | nucleus | 25.71 | 27.9 |
| TraesCS7A01G458700.1 | Wheat | nucleus | 23.09 | 26.24 |
| TraesCS6A01G137800.1 | Wheat | nucleus | 22.88 | 26.12 |
| TraesCS7A01G377100.1 | Wheat | nucleus | 25.93 | 24.39 |
| TraesCS2A01G415400.1 | Wheat | nucleus | 16.56 | 22.89 |
| TraesCS7A01G251700.1 | Wheat | nucleus | 16.34 | 21.01 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G308100.2 | EnsemblPlantsGene:TraesCS1A01G308100 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF475 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:499447147..499450453
Molecular Weight (calculated)
50580.7 Da
IEP (calculated)
4.933
GRAVY (calculated)
-0.582
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRAKSESDR VMPGPDQVDL ASHDDDSARE SPRRRAGPQL KKGPWTPAED AILEAYVKKH GVQNWNVVQK DTGLLRCGKS CRLRWANHLR PDLKKGTFTK
101: EEENLIIKLH SKMGNKWARM AARLPGRTDN EIKNYWNTRI KKCQRTSTPI YPAEICLQAS NEDQHESADF SFSEKLANDL LHGNGLYDPS STWGDFIDDQ
201: EALSYAPQLP DVSFSNLPGL YFESTNHGFV DQVNQAEVLK ESEISFPWLN AAINGTFDGS HAFSNGNFST SRPMTGPWKM ELPSFQFAGS DPNNWSAYSR
301: TCAAQGANFA DPCMRSSAAM ASAKFEHMCM IPGNSGQLEE PLPEAHAVSS AENQQLSVGS SSASTGSPCD AMVETSELHF LERDPNLYAL VNSCSPASPL
401: CQASPDELPC SDFSSAASPV FVSDEPTILQ YEKGFLLPHP EDSGADAFSH WNAMPPIFQ
101: EEENLIIKLH SKMGNKWARM AARLPGRTDN EIKNYWNTRI KKCQRTSTPI YPAEICLQAS NEDQHESADF SFSEKLANDL LHGNGLYDPS STWGDFIDDQ
201: EALSYAPQLP DVSFSNLPGL YFESTNHGFV DQVNQAEVLK ESEISFPWLN AAINGTFDGS HAFSNGNFST SRPMTGPWKM ELPSFQFAGS DPNNWSAYSR
301: TCAAQGANFA DPCMRSSAAM ASAKFEHMCM IPGNSGQLEE PLPEAHAVSS AENQQLSVGS SSASTGSPCD AMVETSELHF LERDPNLYAL VNSCSPASPL
401: CQASPDELPC SDFSSAASPV FVSDEPTILQ YEKGFLLPHP EDSGADAFSH WNAMPPIFQ
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.