Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G130100.1 | Wheat | nucleus | 94.8 | 94.13 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 90.78 | 91.0 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 86.29 | 85.48 |
| Zm00001d033075_P001 | Maize | nucleus | 51.77 | 58.87 |
| KXG38121 | Sorghum | nucleus | 60.05 | 55.58 |
| Zm00001d013801_P001 | Maize | nucleus | 57.45 | 52.94 |
| Os03t0578900-00 | Rice | nucleus | 61.47 | 49.24 |
| GSMUA_Achr4P23690_001 | Banana | nucleus | 30.97 | 35.6 |
| GSMUA_Achr7P00280_001 | Banana | nucleus | 27.19 | 35.28 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 19.39 | 28.98 |
| TraesCS7A01G458700.1 | Wheat | nucleus | 27.66 | 28.96 |
| TraesCS6A01G137800.1 | Wheat | nucleus | 26.95 | 28.36 |
| GSMUA_Achr4P27730_001 | Banana | nucleus | 23.4 | 27.89 |
| GSMUA_Achr2P13930_001 | Banana | nucleus | 20.09 | 25.84 |
| TraesCS1A01G308100.2 | Wheat | nucleus | 27.9 | 25.71 |
| TraesCS2A01G415400.1 | Wheat | nucleus | 19.39 | 24.7 |
| TraesCS3A01G336500.1 | Wheat | nucleus | 30.5 | 22.01 |
| TraesCS7A01G251700.1 | Wheat | nucleus | 17.26 | 20.45 |
| TraesCS7A01G377100.1 | Wheat | nucleus | 23.4 | 20.29 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G130700.1 | EnsemblPlantsGene:TraesCS7A01G130700 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | ncoils:Coil |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF916 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:83939595..83942204
Molecular Weight (calculated)
46062.9 Da
IEP (calculated)
5.701
GRAVY (calculated)
-0.591
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATSLEEEQ VAVAADNLDE EVEQMEEGEE EATPVVLKKG PWTTAEDALL VNHVRQHGEG NWNAVQRITG LLRCGKSCRL RWTNHLRPNL KKGAFSPDEE
101: LLVAQLHAQL GNKWARMATH LPGRTDNEIK NYWNTRAKRR QRAGLPMYPP EVQLQLAITK RCRYADFSPP QQSAGSNVLD ATDAGYTSAR PPPLDLAGQL
201: AMANRPVQFL AQTPFSAPSS PWVKPSFARN ARYFQFPHSS PVSPTTPELS LGHRLPGGNR TRFTPLSPSP GAKAELPSCQ LRPASPAAVA ATDNHGGGLG
301: EDQQNLEAML QELHDAIKIE PPRHVSGHAE QDGASGGNKS EGGLLKDDDD IGTLFDMIIP KAFSMTEPTA QADAPNHSGG SISQHGGEDH NVNLTVDHLP
401: IISSEQDWVL DGACQWNNMF GIC
101: LLVAQLHAQL GNKWARMATH LPGRTDNEIK NYWNTRAKRR QRAGLPMYPP EVQLQLAITK RCRYADFSPP QQSAGSNVLD ATDAGYTSAR PPPLDLAGQL
201: AMANRPVQFL AQTPFSAPSS PWVKPSFARN ARYFQFPHSS PVSPTTPELS LGHRLPGGNR TRFTPLSPSP GAKAELPSCQ LRPASPAAVA ATDNHGGGLG
301: EDQQNLEAML QELHDAIKIE PPRHVSGHAE QDGASGGNKS EGGLLKDDDD IGTLFDMIIP KAFSMTEPTA QADAPNHSGG SISQHGGEDH NVNLTVDHLP
401: IISSEQDWVL DGACQWNNMF GIC
001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
Arabidopsis Description
MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.