Factsheet for GSMUA_Achr4P23690_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00280_001	Banana	nucleus	64.13	72.39
GSMUA_Achr7P21550_001	Banana	nucleus	18.21	50.76
GSMUA_Achr2P13930_001	Banana	nucleus	33.97	37.99
HORVU7Hr1G105450.1	Barley	nucleus	31.25	34.64
GSMUA_Achr10P...	Banana	nucleus	35.6	33.94
Zm00001d033075_P001	Maize	nucleus	33.42	33.06
GSMUA_Achr4P27730_001	Banana	nucleus	31.79	32.96
TraesCS7B01G031000.1	Wheat	nucleus	35.6	31.04
TraesCS7D01G130100.1	Wheat	nucleus	35.87	30.99
TraesCS7A01G130700.1	Wheat	nucleus	35.6	30.97
HORVU7Hr1G027370.1	Barley	nucleus	35.87	30.91
HORVU7Hr1G105520.2	Barley	nucleus	31.52	29.74
KXG38121	Sorghum	nucleus	36.14	29.1
TraesCS7D01G446700.1	Wheat	nucleus	31.25	28.75
TraesCS6A01G137800.1	Wheat	nucleus	31.25	28.61
TraesCS6D01G126900.1	Wheat	nucleus	30.98	28.57
Zm00001d013801_P001	Maize	nucleus	35.6	28.54
TraesCS7B01G357900.1	Wheat	nucleus	30.98	28.5
TraesCS7A01G458700.1	Wheat	nucleus	31.25	28.47
HORVU6Hr1G026450.1	Barley	nucleus	30.16	27.75
Zm00001d014364_P002	Maize	nucleus	30.16	27.61
Os06t0679400-01	Rice	nucleus	33.42	27.52
EER90224	Sorghum	nucleus	31.79	27.34
GSMUA_Achr1P17150_001	Banana	nucleus	40.76	25.6
GSMUA_AchrUn_...	Banana	nucleus	38.59	24.83
Os03t0578900-00	Rice	nucleus	34.24	23.86
GSMUA_Achr7P02510_001	Banana	nucleus	34.24	22.46
GSMUA_Achr1P01660_001	Banana	nucleus	19.02	21.74
Zm00001d036577_P001	Maize	nucleus	27.72	19.96
GSMUA_Achr7P21560_001	Banana	nucleus	18.21	15.37

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSMUA_Achr4G23690_001	EnsemblPlants:GSMUA_Achr4P23690_001	EnsemblPlants:GSMUA_Achr4T23690_001
InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0SRI0	InterPro:Myb_dom	PFAM:PF00249	InterPro:PG/BPGM_mutase_AS
ScanProsite:PS00175	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF475	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002948134	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G23690_001]

Coordinates

chr4:-:23700942..23702169

Molecular Weight (calculated)

40473.7 Da

IEP (calculated)

8.581

GRAVY (calculated)

-0.505

Length

368 amino acids

Sequence
(BLAST)

001: MKAEEGERGG KKAERGLKKG PWTPAEDAIL VEHVRRHGEG NWNAVQRHSG LARCGKSCRL RWANHLRPNL KKGSFTPDEE LLILRLHAQL GNKWARMAAQ
101: LPGRTDNEIK NYWNTRLKRR QRAGLPIYPP ELQEAVGFDH QLKQQASTLL RTPPPLPPPP SAAEFSARLP SLRPAPLLDP AIFRPSSGMT LPPLPQNLFS
201: CHLGFGFPLS PASPPPTPTS LFQPQQQLGP GNYEVSRPQR LPPVPWPTMA KMELPSCQLF PEPVGGRDGL TSSGLLEALL QDAHVPEDMK LGELLALPTV
301: GEQEAVWEHV FFGGDSSEAI KETSQGCSLG SATKLEGLDC DMGEFYRTNP PVSVPCVGSL CIRTTNMR

Best Arabidopsis Sequence Match ( AT2G32460.1 )
(BLAST)

001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC

Arabidopsis Description

MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.