Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 65.53 | 67.13 |
| GSMUA_Achr7P21550_001 | Banana | nucleus | 13.99 | 62.12 |
| GSMUA_Achr10P... | Banana | nucleus | 40.27 | 61.14 |
| CDY72198 | Canola | nucleus | 19.97 | 57.64 |
| CDY69320 | Canola | nucleus | 19.8 | 57.14 |
| VIT_13s0067g01630.t01 | Wine grape | nucleus | 50.17 | 52.59 |
| KRH13249 | Soybean | nucleus | 40.78 | 44.84 |
| KRH20589 | Soybean | nucleus | 40.44 | 44.47 |
| KRH56248 | Soybean | nucleus | 38.05 | 43.39 |
| GSMUA_Achr7P21560_001 | Banana | nucleus | 32.25 | 43.35 |
| AT5G06100.4 | Thale cress | nucleus | 37.88 | 42.69 |
| KRH62709 | Soybean | nucleus | 36.86 | 42.35 |
| GSMUA_Achr4P23690_001 | Banana | nucleus | 25.6 | 40.76 |
| Bra002042.1-P | Field mustard | nucleus | 31.57 | 39.36 |
| CDY56849 | Canola | nucleus | 33.11 | 38.57 |
| CDY66041 | Canola | nucleus | 31.57 | 38.46 |
| CDY08526 | Canola | nucleus | 32.76 | 38.25 |
| AT3G11440.1 | Thale cress | nucleus | 35.49 | 37.61 |
| GSMUA_Achr7P00280_001 | Banana | nucleus | 20.82 | 37.42 |
| Bra034842.1-P | Field mustard | nucleus | 32.76 | 37.14 |
| GSMUA_Achr7P02510_001 | Banana | nucleus | 34.47 | 36.01 |
| GSMUA_Achr2P13930_001 | Banana | nucleus | 19.11 | 34.04 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 15.87 | 32.86 |
| GSMUA_Achr4P27730_001 | Banana | nucleus | 18.09 | 29.86 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 12.63 | 22.98 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P17150_001 | EnsemblPlants:GSMUA_Achr1T17150_001 | EnsemblPlantsGene:GSMUA_Achr1G17150_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF938 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002968F9C | UniProt:M0S0M3 | MapMan:15.5.2.1 | : | : |
Description
Putative Transcription factor GAMYB [Source:GMGC_GENE;Acc:GSMUA_Achr1G17150_001]
Coordinates
chr1:+:12797871..12807633
Molecular Weight (calculated)
64199.7 Da
IEP (calculated)
4.907
GRAVY (calculated)
-0.572
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: MIREERERER SDLFDCISHS HISGGFGFWV MNGVPNESDR RMVPKDEIDS TSIEEDSSGG SLNGGNQVLK KGPWTSAEDA ILIDYVKKHG EGNWNAVQKH
101: TGLSRCGKSC RLRWANHLRP NLKKGAFTPE EEQLIIELHA KMGNKWARMA AHLPGRTDNE IKNYWNTRIK RRQRAGLPLY PPNINFQVSD ENQQSKNVNE
201: YSYSDKQPNE LMQGSNFDIP DITFENFNAN YGSLSYAPPF PDIAASNMLN QRIGSLHYPF TNPMSCVKHL RDSENLIPDL HGTDSDGLST YEHFLFKPSG
301: KIKQTFGLGY PYDPDPNGES LTPLESAVPG SHALLNGTFS ASSPIDGTVK LELPSLQYTE TDGNSWLACS STPLEAADTY IESPPTTVSL QSECISPRNS
401: GLLEALLHEA QTLGSAKKKP SDKSSSSTIT PGNVAECSGV SISEKLEEYN DPISPLGRSA SSVFNEYTPP ISGSSLDEFP HSMAPSISAA SDNILVTAKH
501: VSSPNVVDKG ISPCRPDALL GSVWLDDGSQ SAKDQSVFND AIAILLGQDL CNEYKHLPSE PPSMLVQGFG LDSDPWNNMP SACQMP
101: TGLSRCGKSC RLRWANHLRP NLKKGAFTPE EEQLIIELHA KMGNKWARMA AHLPGRTDNE IKNYWNTRIK RRQRAGLPLY PPNINFQVSD ENQQSKNVNE
201: YSYSDKQPNE LMQGSNFDIP DITFENFNAN YGSLSYAPPF PDIAASNMLN QRIGSLHYPF TNPMSCVKHL RDSENLIPDL HGTDSDGLST YEHFLFKPSG
301: KIKQTFGLGY PYDPDPNGES LTPLESAVPG SHALLNGTFS ASSPIDGTVK LELPSLQYTE TDGNSWLACS STPLEAADTY IESPPTTVSL QSECISPRNS
401: GLLEALLHEA QTLGSAKKKP SDKSSSSTIT PGNVAECSGV SISEKLEEYN DPISPLGRSA SSVFNEYTPP ISGSSLDEFP HSMAPSISAA SDNILVTAKH
501: VSSPNVVDKG ISPCRPDALL GSVWLDDGSQ SAKDQSVFND AIAILLGQDL CNEYKHLPSE PPSMLVQGFG LDSDPWNNMP SACQMP
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.