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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72198 Canola nucleus 30.56 83.25
CDY69320 Canola nucleus 30.38 82.76
CDY56849 Canola nucleus 73.96 81.31
CDY08526 Canola nucleus 73.6 81.08
Bra034842.1-P Field mustard nucleus 74.32 79.5
Bra002042.1-P Field mustard nucleus 66.18 77.87
CDY66041 Canola nucleus 66.37 76.3
GSMUA_Achr7P21550_001 Banana nucleus 13.2 55.3
AT5G06100.4 Thale cress nucleus 47.02 50.0
GSMUA_Achr10P... Banana nucleus 29.11 41.71
VIT_13s0067g01630.t01 Wine grape nucleus 42.13 41.68
KRH20589 Soybean nucleus 39.78 41.28
KRH13249 Soybean nucleus 39.24 40.71
KRH56248 Soybean nucleus 35.62 38.33
KRH62709 Soybean nucleus 34.72 37.65
GSMUA_Achr1P17150_001 Banana nucleus 37.61 35.49
GSMUA_AchrUn_... Banana nucleus 35.99 34.79
Zm00001d033075_P001 Maize nucleus 22.78 33.87
HORVU7Hr1G105450.1 Barley nucleus 19.89 33.13
TraesCS4A01G467100.1 Wheat nucleus 16.09 31.45
HORVU7Hr1G027370.1 Barley nucleus 24.05 31.15
AT2G32460.1 Thale cress nucleus 27.49 31.02
AT4G26930.1 Thale cress nucleus 21.7 30.85
KXG38121 Sorghum nucleus 25.32 30.63
TraesCS7D01G130100.1 Wheat nucleus 23.51 30.52
TraesCS7B01G031000.1 Wheat nucleus 23.15 30.33
HORVU7Hr1G105520.2 Barley nucleus 21.34 30.26
TraesCS7D01G446700.1 Wheat nucleus 21.34 29.5
TraesCS7B01G357900.1 Wheat nucleus 21.34 29.5
Zm00001d014364_P002 Maize nucleus 21.16 29.1
Zm00001d013801_P001 Maize nucleus 24.05 28.98
AT2G26960.1 Thale cress nucleus 22.24 28.81
HORVU6Hr1G026450.1 Barley nucleus 20.8 28.75
EER90224 Sorghum nucleus 22.06 28.5
TraesCS6D01G126900.1 Wheat nucleus 20.43 28.32
GSMUA_Achr7P02510_001 Banana nucleus 27.12 26.74
Os06t0679400-01 Rice nucleus 20.98 25.95
GSMUA_Achr7P21560_001 Banana nucleus 20.43 25.92
AT2G26950.1 Thale cress cytosol 17.72 25.65
AT5G55020.1 Thale cress nucleus 23.33 24.67
AT3G60460.1 Thale cress nucleus 13.2 24.33
Os03t0578900-00 Rice nucleus 21.88 22.92
Zm00001d036577_P001 Maize nucleus 20.07 21.72
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1EntrezGene:820317UniProt:A0A178VKX5ProteinID:AAG43496.1ProteinID:AAG51434.1
ProteinID:AEE75047.1EMBL:AF062899ProteinID:ANM65045.1ProteinID:ANM65047.1ArrayExpress:AT3G11440EnsemblPlantsGene:AT3G11440
RefSeq:AT3G11440TAIR:AT3G11440RefSeq:AT3G11440-TAIR-GEnsemblPlants:AT3G11440.1TAIR:AT3G11440.1Symbol:ATMYB65
EMBL:AY519585Unigene:At.43844EMBL:BT003940EMBL:BT005120InterPro:GAMYB-likeGO:GO:0000003
GO:GO:0000981GO:GO:0001135GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0006357GO:GO:0007154GO:GO:0007165GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0008219GO:GO:0008285GO:GO:0009058GO:GO:0009653
GO:GO:0009719GO:GO:0009723GO:GO:0009740GO:GO:0009751GO:GO:0009791GO:GO:0009908
GO:GO:0009987GO:GO:0016043GO:GO:0030154GO:GO:0040007GO:GO:0043068GO:GO:0043565
GO:GO:0044212GO:GO:0045893GO:GO:0045926GO:GO:0048235GO:GO:0048653GO:GO:0048655
GO:GO:1990019InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domRefSeq:NP_001327042.1RefSeq:NP_001327044.1
RefSeq:NP_187751.1ProteinID:OAP06414.1PFAM:PF00249PIRSF:PIRSF001693PO:PO:0000013PO:PO:0000037
PO:PO:0000191PO:PO:0000229PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS51294
PANTHER:PTHR10641PANTHER:PTHR10641:SF938UniProt:Q9FR97InterPro:SANT/MybSMART:SM00717SUPFAM:SSF46689
UniParc:UPI000000C1F2EMBL:Z95778EMBL:Z95788SEG:seg::
Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
Coordinates
chr3:+:3602036..3605172
Molecular Weight (calculated)
61368.6 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.623
Length
553 amino acids
Sequence
(BLAST)
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.