Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20794 | Canola | nucleus | 54.24 | 51.34 |
| Bra035547.1-P | Field mustard | nucleus | 61.44 | 44.1 |
| AT5G55020.1 | Thale cress | nucleus | 57.07 | 42.45 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 28.02 | 32.83 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 31.62 | 30.75 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 30.59 | 30.51 |
| Zm00001d033075_P001 | Maize | nucleus | 28.79 | 30.11 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 30.85 | 30.0 |
| Zm00001d014364_P002 | Maize | nucleus | 30.85 | 29.85 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 32.13 | 29.27 |
| EER90224 | Sorghum | nucleus | 31.88 | 28.97 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 31.36 | 28.91 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 31.36 | 28.64 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 28.53 | 27.82 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 28.53 | 27.75 |
| Os06t0679400-01 | Rice | nucleus | 31.88 | 27.74 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 19.79 | 27.21 |
| AT2G32460.1 | Thale cress | nucleus | 34.19 | 27.14 |
| KXG38121 | Sorghum | nucleus | 31.62 | 26.91 |
| Zm00001d013801_P001 | Maize | nucleus | 31.36 | 26.58 |
| AT3G60460.1 | Thale cress | nucleus | 18.77 | 24.33 |
| AT5G06100.4 | Thale cress | nucleus | 30.85 | 23.08 |
| AT2G26960.1 | Thale cress | nucleus | 25.19 | 22.95 |
| AT3G11440.1 | Thale cress | nucleus | 30.85 | 21.7 |
| Zm00001d036577_P001 | Maize | nucleus | 28.28 | 21.53 |
| AT2G26950.1 | Thale cress | cytosol | 21.08 | 21.47 |
| Os03t0578900-00 | Rice | nucleus | 28.02 | 20.64 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:828800 | ProteinID:AEE85271.1 | EMBL:AF176002 | ArrayExpress:AT4G26930 |
| EnsemblPlantsGene:AT4G26930 | RefSeq:AT4G26930 | TAIR:AT4G26930 | RefSeq:AT4G26930-TAIR-G | EnsemblPlants:AT4G26930.1 | TAIR:AT4G26930.1 |
| ProteinID:CAB36539.1 | ProteinID:CAB79548.1 | EMBL:DQ653226 | GO:GO:0000003 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006357 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 |
| GO:GO:0009856 | GO:GO:0009987 | GO:GO:0010468 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0030154 | GO:GO:0040007 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 |
| GO:GO:0048235 | GO:GO:0080092 | GO:GO:0090406 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | Symbol:MYB97 |
| InterPro:Myb_dom | RefSeq:NP_194423.1 | PFAM:PF00249 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0025195 |
| PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF475 | UniProt:Q9S773 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000AAC88 | SEG:seg | : | : |
Description
MYB97Transcription factor MYB97 [Source:UniProtKB/Swiss-Prot;Acc:Q9S773]
Coordinates
chr4:+:13527578..13529429
Molecular Weight (calculated)
43580.7 Da
IEP (calculated)
5.838
GRAVY (calculated)
-0.677
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MIVYGGGASE DGEGGGVVLK KGPWTVAEDE TLAAYVREYG EGNWNSVQKK TWLARCGKSC RLRWANHLRP NLRKGSFTPE EERLIIQLHS QLGNKWARMA
101: AQLPGRTDNE IKNYWNTRLK RFQRQGLPLY PPEYSQNNHQ QQMYPQQPSS PLPSQTPASS FTFPLLQPPS LCPKRCYNTA FSPKASYISS PTNFLVSSPT
201: FLHTHSSLSS YQSTNPVYSM KHELSSNQIP YSASLGVYQV SKFSDNGDCN QNLNTGLHTN TCQLLEDLME EAEALADSFR APKRRQIMAA LEDNNNNNNF
301: FSGGFGHRVS SNSLCSLQGL TPKEDESLQM NTMQDEDITK LLDWGSESEE ISNGQSSVIT TENNLVLDDH QFAFLFPVDD DTNNLPGIC
101: AQLPGRTDNE IKNYWNTRLK RFQRQGLPLY PPEYSQNNHQ QQMYPQQPSS PLPSQTPASS FTFPLLQPPS LCPKRCYNTA FSPKASYISS PTNFLVSSPT
201: FLHTHSSLSS YQSTNPVYSM KHELSSNQIP YSASLGVYQV SKFSDNGDCN QNLNTGLHTN TCQLLEDLME EAEALADSFR APKRRQIMAA LEDNNNNNNF
301: FSGGFGHRVS SNSLCSLQGL TPKEDESLQM NTMQDEDITK LLDWGSESEE ISNGQSSVIT TENNLVLDDH QFAFLFPVDD DTNNLPGIC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.