Factsheet for Bra035547.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20794	Canola	nucleus	74.91	98.78
Bra028997.1-P	Field mustard	nucleus	76.57	75.05
Bra002938.1-P	Field mustard	nucleus	77.86	73.39
AT4G26930.1	Thale cress	nucleus	44.1	61.44
Bra021791.1-P	Field mustard	nucleus	23.99	33.51
Zm00001d033075_P001	Maize	nucleus	22.51	32.8
HORVU7Hr1G105450.1	Barley	nucleus	19.93	32.53
HORVU7Hr1G105520.2	Barley	nucleus	22.14	30.77
TraesCS7D01G446700.1	Wheat	nucleus	22.32	30.25
TraesCS7B01G357900.1	Wheat	nucleus	22.32	30.25
Bra022888.1-P	Field mustard	nucleus	25.09	29.76
TraesCS4A01G467100.1	Wheat	nucleus	15.5	29.68
Bra007536.1-P	Field mustard	nucleus	14.58	29.37
HORVU7Hr1G027370.1	Barley	nucleus	23.06	29.27
EER90224	Sorghum	nucleus	23.06	29.21
KXG38121	Sorghum	nucleus	24.54	29.1
TraesCS7B01G031000.1	Wheat	nucleus	22.51	28.91
TraesCS7D01G130100.1	Wheat	nucleus	22.51	28.64
Zm00001d014364_P002	Maize	nucleus	21.22	28.61
Zm00001d013801_P001	Maize	nucleus	23.99	28.32
TraesCS6D01G126900.1	Wheat	nucleus	20.48	27.82
Bra000531.1-P	Field mustard	nucleus	22.32	27.82
Bra005597.1-P	Field mustard	nucleus	24.54	27.77
Os06t0679400-01	Rice	nucleus	22.88	27.74
Bra003413.1-P	Field mustard	nucleus	14.39	26.8
HORVU6Hr1G026450.1	Barley	nucleus	19.56	26.5
Bra002042.1-P	Field mustard	nucleus	21.59	24.89
Bra034842.1-P	Field mustard	nucleus	23.06	24.18
Os03t0578900-00	Rice	nucleus	22.51	23.11
Zm00001d036577_P001	Maize	nucleus	20.66	21.92

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra035547	EnsemblPlants:Bra035547.1	EnsemblPlants:Bra035547.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009856	GO:GO:0009987	GO:GO:0010468
GO:GO:0016043	GO:GO:0016049	GO:GO:0030154	GO:GO:0040007	GO:GO:0045893	GO:GO:0048235
GO:GO:0080092	GO:GO:0090406	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4F397	InterPro:Myb_dom
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF475	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002546677	SEG:seg	:	:	:

Description

AT5G55020 (E=1e-071) ATMYB120, MYB120 | MYB120 (MYB DOMAIN PROTEIN 120); DNA binding / transcription factor

Coordinates

chrA02:+:7594161..7595968

Molecular Weight (calculated)

60961.1 Da

IEP (calculated)

6.761

GRAVY (calculated)

-0.796

Length

542 amino acids

Sequence
(BLAST)

001: MVMYGGGAWK DGESNNHISD GGVALKKGPW MAAEDEMLAS YVRENGEGNW NSLQKNTGLT RCGKSCRLRW ANHLRPNLKK GSFTDDEEHI IIQLHAQLGN
101: KWARMAAQLP GRTDNEIKNY WNMRLKRLQR QGLPLYPPDI ILYHQLHKHN HYHDQQHQHN QMYFQPQSSE PSTPSSSPLP SPTPVNANAS SSFTFQTTNA
201: STANLLHPLS SHTPTTPPQS PFSSPFSSPQ NNQYTTLPVF SLPCSQNVNF TFPRTPPLLQ PPSSFLDKRY NNANTSLNCI NRVSTAPFSL FTRESYTSFL
301: TLPYSSPTAQ NATYYNTNNI YSSSPSFSLN PSPSSYPTTS SSSPSFLHSY YTPNSSSTSF HTNTTYSMKQ ELPSNQTLQI CAFNNVNNFT DNEKHNSTGF
401: HRRSISCSLL EDVLKEAEAL EDISVDRPPK RRQLTASPPK NHNNNGDFFS VSFGQYGSSE NTCSLQDLKS KEEVSLQMNT MQEDVAKFFD WESNSGEILN
501: GQSSVVTDDN LVLDVHQFES LAANYEQNNN NNCSWDDLHE IR

Best Arabidopsis Sequence Match ( AT5G55020.1 )
(BLAST)

001: MIMYGGGGAG KDGGSTNHLS DGGVILKKGP WTAAEDEILA AYVRENGEGN WNAVQKNTGL ARCGKSCRLR WANHLRPNLK KGSFTGDEER LIIQLHAQLG
101: NKWARMAAQL PGRTDNEIKN YWNTRLKRLL RQGLPLYPPD IIPNHQLHPH PHHQQQQQHN HHHHHHQQQQ QHQQMYFQPQ SSQRNTPSSS PLPSPTPANA
201: KSSSSFTFHT TTANLLHPLS PHTPNTPSQL SSTPPPPPLS SPLCSPRNNQ YPTLPLFALP RSQINNNNNG NFTFPRPPPL LQPPSSLFAK RYNNANTPLN
301: CINRVSTAPF SPVSRDSYTS FLTLPYPSPT AQTATYHNTN NPYSSSPSFS LNPSSSSYPT STSSPSFLHS HYTPSSTSFH TNPVYSMKQE QLPSNQIPQI
401: DGFNNVNNFT DNERQNHNLN SSGAHRRSSS CSLLEDVFEE AEALASGGRG RPPKRRQLTA SLPNHNNNTN NNDNFFSVSF GHYDSSDNLC SLQGKTKTTY
501: NTSNLNYSSL QVKCKMFMIK TQI

Arabidopsis Description

ATMYB120Transcription factor MYB120 [Source:UniProtKB/Swiss-Prot;Acc:Q94FL7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.