Factsheet for Bra007536.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41164	Canola	nucleus	100.0	98.9
AT3G60460.1	Thale cress	nucleus	83.64	75.0
Bra003413.1-P	Field mustard	nucleus	79.55	73.54
HORVU7Hr1G051740.1	Barley	nucleus	34.57	56.36
KRH48761	Soybean	nucleus	55.02	47.74
Os06t0118150-00	Rice	nucleus	17.47	47.0
KRH66578	Soybean	nucleus	54.28	46.95
VIT_15s0021g02040.t01	Wine grape	nucleus	53.16	46.28
PGSC0003DMT400066066	Potato	nucleus	47.58	41.83
Solyc10g019260.1.1	Tomato	nucleus	46.84	41.45
Solyc01g090530.1.1	Tomato	nucleus	48.33	40.75
Zm00001d031515_P001	Maize	nucleus	39.03	35.71
TraesCS2A01G415400.1	Wheat	nucleus	43.49	35.24
TraesCS2B01G434400.1	Wheat	nucleus	43.12	35.05
TraesCS2D01G412500.1	Wheat	nucleus	43.12	34.94
EES15365	Sorghum	nucleus	39.78	34.63
Zm00001d002750_P001	Maize	nucleus	40.52	31.69
Zm00001d026186_P001	Maize	nucleus	39.41	30.64
GSMUA_Achr1P01660_001	Banana	nucleus	36.43	30.43
TraesCS7A01G251700.1	Wheat	nucleus	39.41	29.69
EES11224	Sorghum	nucleus	41.26	29.37
TraesCS7B01G139400.1	Wheat	nucleus	38.66	29.3
Bra021791.1-P	Field mustard	nucleus	23.79	16.49
Bra000531.1-P	Field mustard	nucleus	25.65	15.86
Bra002042.1-P	Field mustard	nucleus	25.65	14.68
Bra005597.1-P	Field mustard	nucleus	26.02	14.61
Bra035547.1-P	Field mustard	nucleus	29.37	14.58
Bra034842.1-P	Field mustard	nucleus	27.14	14.12
Bra022888.1-P	Field mustard	nucleus	23.79	14.0
Bra028997.1-P	Field mustard	nucleus	28.25	13.74
Bra002938.1-P	Field mustard	nucleus	28.25	13.22

Protein Annotations

EnsemblPlants:Bra007536.1	EnsemblPlants:Bra007536.1-P	EnsemblPlantsGene:Bra007536	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF488	PFAM:PF00249	PFAM:PF13921	PFscan:PS51294	SEG:seg
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00025428B8	UniProt:M4CTJ2	MapMan:15.5.2.1	:

Description

AT3G60460 (E=2e-082) DUO1 | DUO1 (DUO POLLEN 1); DNA binding / transcription factor

Coordinates

chrA09:-:29668027..29668928

Molecular Weight (calculated)

30622.7 Da

IEP (calculated)

6.685

GRAVY (calculated)

-0.832

Length

269 amino acids

Sequence
(BLAST)

001: MEATKKEDIK KGPWKAEEDE VLINHVKRYG PRDWSSIRSK GLLQRTGKSC RLRWVNKLRP NLKNGCKFSA DEEKTVIDLQ SQFGNKWARI ATYLPGRTDN
101: DVKNFWSSRL KRLARILHNS SDASSSSCFD PKPNKGKNVK PIQSQSFGLV EEETRASSAT TSKILPYSSP LSDQVDDEAL IRSPELGIKL ENHQPFTFGT
201: DLDDPFFYDI LGPADSSEPL FGLPQPFFEP SPAPRRFRHV SKDDEESDVF LHDFPADMFD QVDDQTRSP

Best Arabidopsis Sequence Match ( AT3G60460.1 )
(BLAST)

001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP

Arabidopsis Description

DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.