Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72198 | Canola | nucleus | 42.98 | 99.51 |
| CDY69320 | Canola | nucleus | 42.77 | 99.01 |
| CDY66041 | Canola | nucleus | 97.02 | 94.8 |
| AT3G11440.1 | Thale cress | nucleus | 77.87 | 66.18 |
| Bra034842.1-P | Field mustard | nucleus | 72.77 | 66.15 |
| GSMUA_Achr7P21550_001 | Banana | nucleus | 14.68 | 52.27 |
| GSMUA_Achr10P... | Banana | nucleus | 31.7 | 38.6 |
| KRH20589 | Soybean | nucleus | 40.64 | 35.83 |
| KRH13249 | Soybean | nucleus | 40.43 | 35.65 |
| VIT_13s0067g01630.t01 | Wine grape | nucleus | 42.34 | 35.6 |
| KRH56248 | Soybean | nucleus | 35.96 | 32.88 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 23.19 | 32.83 |
| KRH62709 | Soybean | nucleus | 34.89 | 32.16 |
| GSMUA_Achr1P17150_001 | Banana | nucleus | 39.36 | 31.57 |
| Zm00001d033075_P001 | Maize | nucleus | 24.89 | 31.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.66 | 30.94 |
| Bra021791.1-P | Field mustard | nucleus | 25.11 | 30.41 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 24.47 | 29.49 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 17.66 | 29.33 |
| Bra022888.1-P | Field mustard | nucleus | 28.3 | 29.1 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 24.26 | 28.5 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 24.26 | 28.5 |
| Zm00001d014364_P002 | Maize | nucleus | 24.26 | 28.36 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 24.04 | 28.25 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 25.53 | 28.1 |
| EER90224 | Sorghum | nucleus | 25.53 | 28.04 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 25.11 | 27.96 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 25.32 | 27.93 |
| Bra000531.1-P | Field mustard | nucleus | 25.32 | 27.36 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 23.19 | 27.32 |
| KXG38121 | Sorghum | nucleus | 26.17 | 26.91 |
| Zm00001d013801_P001 | Maize | nucleus | 25.74 | 26.36 |
| Bra005597.1-P | Field mustard | nucleus | 26.6 | 26.1 |
| Bra003413.1-P | Field mustard | nucleus | 15.96 | 25.77 |
| Bra007536.1-P | Field mustard | nucleus | 14.68 | 25.65 |
| GSMUA_Achr7P02510_001 | Banana | nucleus | 30.21 | 25.31 |
| Os06t0679400-01 | Rice | nucleus | 23.4 | 24.61 |
| Bra028997.1-P | Field mustard | nucleus | 27.02 | 22.97 |
| Os03t0578900-00 | Rice | nucleus | 24.89 | 22.16 |
| Bra002938.1-P | Field mustard | nucleus | 27.02 | 22.09 |
| GSMUA_Achr7P21560_001 | Banana | nucleus | 20.21 | 21.79 |
| Bra035547.1-P | Field mustard | nucleus | 24.89 | 21.59 |
| Zm00001d036577_P001 | Maize | nucleus | 23.19 | 21.33 |
Protein Annotations
| EnsemblPlants:Bra002042.1 | EnsemblPlants:Bra002042.1-P | EnsemblPlantsGene:Bra002042 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF938 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002543EF4 | UniProt:M4CCW1 | MapMan:15.5.2.1 | : | : |
Description
AT3G11440 (E=6e-101) ATMYB65, MYB65 | MYB65 (MYB DOMAIN PROTEIN 65); DNA binding / transcription factor
Coordinates
chrA10:-:11960248..11961819
Molecular Weight (calculated)
52075.5 Da
IEP (calculated)
5.910
GRAVY (calculated)
-0.608
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYTMVTDES DDAMYSSIYN ESPSAADNIG SGCTSRGKGS VLKKGPWTST EDGILIDYVK RHGEGNWNTV QKHTSLARCG KSCRLRWANH LRPNLKKGAF
101: SKEEEQLIVE MHARMGNKWA QMAEHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPGTHVE DLHWSQEYHP STSNVTDRRR HQDILQLGNS KANVLFDDLT
201: FANVLFEDLN FATSLLPVAS DISDMLGTGA SSYMSPILPS HSNIRQAFQS PEHFQNAAPQ KNPRSCSISD HPLYGNQHRT DVMIQDSHHT FTDGMVPTSK
301: PLFGAVKLEL PSFQYSEASG FDQWTTPSTP QSDLLDSVDT YIQSPPPLEI DEPDCFSSCD TGLLDMLLHE AKIKASAKHS FSSTTCATDG TQDVPRGGDT
401: HNVTSGAGGN SSAFAVVKTE ELDQVWEPKR ADVIRPDVLL ESSWQDQQSR FGIVRDSSSL NDALALLLGG
101: SKEEEQLIVE MHARMGNKWA QMAEHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPGTHVE DLHWSQEYHP STSNVTDRRR HQDILQLGNS KANVLFDDLT
201: FANVLFEDLN FATSLLPVAS DISDMLGTGA SSYMSPILPS HSNIRQAFQS PEHFQNAAPQ KNPRSCSISD HPLYGNQHRT DVMIQDSHHT FTDGMVPTSK
301: PLFGAVKLEL PSFQYSEASG FDQWTTPSTP QSDLLDSVDT YIQSPPPLEI DEPDCFSSCD TGLLDMLLHE AKIKASAKHS FSSTTCATDG TQDVPRGGDT
401: HNVTSGAGGN SSAFAVVKTE ELDQVWEPKR ADVIRPDVLL ESSWQDQQSR FGIVRDSSSL NDALALLLGG
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.