Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P21550_001 | Banana | nucleus | 16.96 | 36.36 |
| CDY69320 | Canola | nucleus | 21.91 | 30.54 |
| CDY72198 | Canola | nucleus | 21.91 | 30.54 |
| KRH14648 | Soybean | extracellular, golgi | 26.5 | 22.06 |
| GSMUA_Achr10P... | Banana | nucleus | 29.33 | 21.5 |
| Bra021791.1-P | Field mustard | nucleus | 28.27 | 20.62 |
| AT2G26950.1 | Thale cress | cytosol | 27.56 | 20.42 |
| CDY20794 | Canola | nucleus | 28.98 | 19.95 |
| AT4G26930.1 | Thale cress | nucleus | 27.21 | 19.79 |
| CDY67258 | Canola | nucleus | 29.68 | 19.53 |
| TraesCS6A01G137800.1 | Wheat | nucleus | 27.56 | 19.4 |
| TraesCS7A01G130700.1 | Wheat | nucleus | 28.98 | 19.39 |
| CDY19890 | Canola | nucleus | 29.33 | 19.35 |
| CDY19141 | Canola | nucleus | 30.04 | 19.14 |
| Solyc06g073640.2.1 | Tomato | nucleus | 33.92 | 19.05 |
| PGSC0003DMT400015156 | Potato | nucleus | 33.57 | 18.92 |
| CDY15321 | Canola | nucleus | 29.68 | 18.75 |
| TraesCS2A01G415400.1 | Wheat | nucleus | 21.91 | 18.67 |
| KRH46194 | Soybean | nucleus | 30.04 | 18.6 |
| TraesCS7A01G458700.1 | Wheat | nucleus | 26.5 | 18.56 |
| KRH46191 | Soybean | nucleus | 30.04 | 18.44 |
| TraesCS1A01G308100.2 | Wheat | nucleus | 29.68 | 18.3 |
| CDY38535 | Canola | nucleus | 27.56 | 18.06 |
| AT2G26960.1 | Thale cress | nucleus | 27.21 | 18.03 |
| AT2G32460.1 | Thale cress | nucleus | 31.1 | 17.96 |
| CDY08526 | Canola | nucleus | 31.45 | 17.73 |
| KRH46196 | Soybean | nucleus | 22.97 | 17.71 |
| KRH56248 | Soybean | nucleus | 32.16 | 17.7 |
| CDX83247 | Canola | nucleus | 27.21 | 17.7 |
| Bra000531.1-P | Field mustard | nucleus | 27.21 | 17.7 |
| CDY56849 | Canola | nucleus | 31.45 | 17.69 |
| Bra002042.1-P | Field mustard | nucleus | 29.33 | 17.66 |
| CDY66700 | Canola | nucleus | 27.56 | 17.57 |
| CDY48264 | Canola | nucleus | 29.68 | 17.54 |
| Solyc07g052300.2.1 | Tomato | nucleus | 30.04 | 17.49 |
| CDY66041 | Canola | nucleus | 29.68 | 17.46 |
| KRH62709 | Soybean | nucleus | 31.45 | 17.45 |
| KRH26778 | Soybean | nucleus | 29.33 | 17.4 |
| VIT_06s0009g02480.t01 | Wine grape | nucleus | 32.16 | 17.37 |
| VIT_13s0067g01630.t01 | Wine grape | nucleus | 34.28 | 17.35 |
| Bra005597.1-P | Field mustard | nucleus | 29.33 | 17.33 |
| KRH22574 | Soybean | nucleus | 29.33 | 17.33 |
| CDY12203 | Canola | nucleus | 29.33 | 17.26 |
| Bra034842.1-P | Field mustard | nucleus | 31.45 | 17.21 |
| PGSC0003DMT400070549 | Potato | nucleus | 29.33 | 17.11 |
| PGSC0003DMT400036086 | Potato | nucleus | 28.62 | 17.02 |
| KRG98748 | Soybean | nucleus | 31.8 | 17.01 |
| PGSC0003DMT400074486 | Potato | nucleus | 28.98 | 16.94 |
| KRH13249 | Soybean | nucleus | 31.8 | 16.89 |
| KRH20589 | Soybean | nucleus | 31.8 | 16.89 |
| PGSC0003DMT400058426 | Potato | nucleus | 31.1 | 16.83 |
| VIT_19s0090g00590.t01 | Wine grape | nucleus | 27.56 | 16.81 |
| Bra022888.1-P | Field mustard | nucleus | 26.86 | 16.63 |
| CDY68663 | Canola | nucleus | 26.86 | 16.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.57 | 16.61 |
| TraesCS3A01G336500.1 | Wheat | nucleus | 34.28 | 16.55 |
| KRH18640 | Soybean | nucleus | 31.1 | 16.48 |
| VIT_12s0059g00700.t01 | Wine grape | nucleus | 24.73 | 16.43 |
| Solyc01g009070.2.1 | Tomato | nucleus | 31.1 | 16.39 |
| AT5G06100.4 | Thale cress | nucleus | 30.04 | 16.35 |
| AT5G55020.1 | Thale cress | nucleus | 30.04 | 16.25 |
| KRG89766 | Soybean | nucleus | 29.68 | 16.12 |
| AT3G11440.1 | Thale cress | nucleus | 31.45 | 16.09 |
| TraesCS7A01G251700.1 | Wheat | nucleus | 20.14 | 15.97 |
| CDY43016 | Canola | nucleus | 31.1 | 15.88 |
| GSMUA_Achr1P17150_001 | Banana | nucleus | 32.86 | 15.87 |
| Bra028997.1-P | Field mustard | nucleus | 30.74 | 15.73 |
| TraesCS7A01G377100.1 | Wheat | nucleus | 26.86 | 15.57 |
| Bra035547.1-P | Field mustard | nucleus | 29.68 | 15.5 |
| CDY61426 | Canola | nucleus | 30.04 | 15.26 |
| Bra002938.1-P | Field mustard | nucleus | 30.74 | 15.13 |
| Solyc11g072060.1.1 | Tomato | nucleus | 27.92 | 14.63 |
| GSMUA_Achr7P02510_001 | Banana | nucleus | 28.27 | 14.26 |
| CDX71481 | Canola | nucleus | 27.92 | 13.86 |
| Solyc12g005890.1.1 | Tomato | nucleus | 18.73 | 13.09 |
| GSMUA_Achr7P21560_001 | Banana | nucleus | 13.07 | 8.49 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G467100.1 | EnsemblPlantsGene:TraesCS4A01G467100 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF936 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:729632513..729633448
Molecular Weight (calculated)
32650.8 Da
IEP (calculated)
10.115
GRAVY (calculated)
-0.619
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSPFLKKG PWTPEEDKLL VDYIQKNGMG NWGAIRRLTG LDRCSKSCRL RWTRHLRTNI KRGGFTDDEG KLIIQLHSIL GNKWAQIAEK MPGKTDNDIK
101: NYWNMHLRKK LFRKGIDPNT HRLYPYLSPI AAAAGGSSGT GAGWDIYDLM LQVDSAMNHL LQGHCSVISS SLGAMRSLVG KLDMLLLAPS SRQGFSSKRV
201: KDGMRLLKDD VEEISIYLDE LLEVEDPPPI AMCWMNEARE LSYDMEDYMD NLLFVPPDYV NNNRQKKKRK KKKMIKKRIK WYK
101: NYWNMHLRKK LFRKGIDPNT HRLYPYLSPI AAAAGGSSGT GAGWDIYDLM LQVDSAMNHL LQGHCSVISS SLGAMRSLVG KLDMLLLAPS SRQGFSSKRV
201: KDGMRLLKDD VEEISIYLDE LLEVEDPPPI AMCWMNEARE LSYDMEDYMD NLLFVPPDYV NNNRQKKKRK KKKMIKKRIK WYK
001: MGRTPCCDKI GLKKGPWTPE EDEVLVAHIK KNGHGSWRTL PKLAGLLRCG KSCRLRWTNY LRPDIKRGPF TADEEKLVIQ LHAILGNRWA AIAAQLPGRT
101: DNEIKNLWNT HLKKRLLSMG LDPRTHEPLP SYGLAKQAPS SPTTRHMAQW ESARVEAEAR LSRESMLFSP SFYSGVVKTE CDHFLRIWNS EIGEAFRNLA
201: PLDESTITSQ SPCSRATSTS SALLKSSTNS WGGKEVTVAI HGSDYSPYSN DLEDDSTDSA LQLLLDFPIS DDDMSFLEEN IDSYSQAPPI GLVSMVSKF
101: DNEIKNLWNT HLKKRLLSMG LDPRTHEPLP SYGLAKQAPS SPTTRHMAQW ESARVEAEAR LSRESMLFSP SFYSGVVKTE CDHFLRIWNS EIGEAFRNLA
201: PLDESTITSQ SPCSRATSTS SALLKSSTNS WGGKEVTVAI HGSDYSPYSN DLEDDSTDSA LQLLLDFPIS DDDMSFLEEN IDSYSQAPPI GLVSMVSKF
Arabidopsis Description
AtMYB17Transcription factor MYB41 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2D9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.