Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67258 | Canola | nucleus | 98.37 | 98.14 |
| CDY20794 | Canola | nucleus | 75.52 | 78.83 |
| Bra002938.1-P | Field mustard | nucleus | 98.14 | 73.22 |
| CDY61426 | Canola | nucleus | 80.89 | 62.3 |
| CDY43016 | Canola | nucleus | 79.72 | 61.73 |
| AT5G55020.1 | Thale cress | nucleus | 68.76 | 56.41 |
| CDY72198 | Canola | nucleus | 21.21 | 44.83 |
| CDY69320 | Canola | nucleus | 21.21 | 44.83 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 25.64 | 33.13 |
| Zm00001d033075_P001 | Maize | nucleus | 27.97 | 32.26 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 28.67 | 31.54 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 28.9 | 31.0 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 28.44 | 30.5 |
| CDY19141 | Canola | nucleus | 31.24 | 30.18 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 29.84 | 29.98 |
| CDY15321 | Canola | nucleus | 31.0 | 29.69 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 19.35 | 29.33 |
| CDY66700 | Canola | nucleus | 30.3 | 29.28 |
| KXG38121 | Sorghum | nucleus | 30.54 | 28.67 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 27.97 | 28.44 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 27.97 | 28.17 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 26.11 | 28.07 |
| Zm00001d014364_P002 | Maize | nucleus | 26.11 | 27.86 |
| CDY68663 | Canola | nucleus | 29.6 | 27.79 |
| Os06t0679400-01 | Rice | nucleus | 28.67 | 27.52 |
| Zm00001d013801_P001 | Maize | nucleus | 29.37 | 27.45 |
| EER90224 | Sorghum | nucleus | 27.27 | 27.34 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 25.41 | 27.25 |
| CDY12203 | Canola | nucleus | 29.84 | 26.61 |
| CDY48264 | Canola | nucleus | 29.6 | 26.51 |
| CDX83247 | Canola | nucleus | 26.57 | 26.21 |
| CDY38535 | Canola | nucleus | 26.34 | 26.16 |
| CDY41164 | Canola | nucleus | 16.55 | 26.1 |
| CDX71809 | Canola | nucleus | 16.08 | 25.37 |
| CDY08526 | Canola | nucleus | 29.14 | 24.9 |
| CDY56849 | Canola | nucleus | 29.14 | 24.85 |
| CDY66041 | Canola | nucleus | 27.74 | 24.74 |
| CDX67827 | Canola | nucleus | 17.02 | 24.01 |
| CDY64759 | Canola | nucleus | 17.02 | 23.93 |
| Os03t0578900-00 | Rice | nucleus | 27.04 | 21.97 |
| CDX71481 | Canola | nucleus | 28.67 | 21.58 |
| Zm00001d036577_P001 | Maize | nucleus | 25.17 | 21.14 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078FZZ1 | UniProt:A0A078FZZ1 | EnsemblPlants:CDY19890 | ProteinID:CDY19890 |
| ProteinID:CDY19890.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00009670001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF475 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF1557 | SEG:seg |
Description
BnaC09g31560DBnaC09g31560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZZ1]
Coordinates
chrLK032101:-:260790..262747
Molecular Weight (calculated)
48318.4 Da
IEP (calculated)
6.387
GRAVY (calculated)
-0.933
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMYGGEIEK AGGSANHMSN GGGVVLKKGP WTAAEDEILS VYVRENGEGN WNAVQKNTGL VRCGKSCRLR WANHLRPNLR KGSFTGDEER LIIQLHAQLG
101: NKWARMAAQL PGRTDNEIKN YWNTRLKRLQ RQGLPLYPPD IIPNHQLHPH PHHHQQNHHQ QQHQHQQIDS YTSFLTLPYS SPTAQTATYH NTNNNYSSFS
201: LNPSPSSYPT TTSSPSFLHS QYTPNYSSTS FHNNPVYSMK QEFPSNQIPQ IGVFNNVNNF TDNEKQNNTN LHRRSISCSL LEDVLVEAEA LAGGDGDRPS
301: KRRQLTASPP NHHNNNNNDN DNFFSVSFEQ YDSSENICSL QDLKPKEEES LQMNTMQDDI AKLLDWGSDS GEISNGQSSV LTDDNLVLDV HQLNSLFPAD
401: STAAETRTND EQNNNDKINC SWDNLHGVS
101: NKWARMAAQL PGRTDNEIKN YWNTRLKRLQ RQGLPLYPPD IIPNHQLHPH PHHHQQNHHQ QQHQHQQIDS YTSFLTLPYS SPTAQTATYH NTNNNYSSFS
201: LNPSPSSYPT TTSSPSFLHS QYTPNYSSTS FHNNPVYSMK QEFPSNQIPQ IGVFNNVNNF TDNEKQNNTN LHRRSISCSL LEDVLVEAEA LAGGDGDRPS
301: KRRQLTASPP NHHNNNNNDN DNFFSVSFEQ YDSSENICSL QDLKPKEEES LQMNTMQDDI AKLLDWGSDS GEISNGQSSV LTDDNLVLDV HQLNSLFPAD
401: STAAETRTND EQNNNDKINC SWDNLHGVS
001: MIVYGGGASE DGEGGGVVLK KGPWTVAEDE TLAAYVREYG EGNWNSVQKK TWLARCGKSC RLRWANHLRP NLRKGSFTPE EERLIIQLHS QLGNKWARMA
101: AQLPGRTDNE IKNYWNTRLK RFQRQGLPLY PPEYSQNNHQ QQMYPQQPSS PLPSQTPASS FTFPLLQPPS LCPKRCYNTA FSPKASYISS PTNFLVSSPT
201: FLHTHSSLSS YQSTNPVYSM KHELSSNQIP YSASLGVYQV SKFSDNGDCN QNLNTGLHTN TCQLLEDLME EAEALADSFR APKRRQIMAA LEDNNNNNNF
301: FSGGFGHRVS SNSLCSLQGL TPKEDESLQM NTMQDEDITK LLDWGSESEE ISNGQSSVIT TENNLVLDDH QFAFLFPVDD DTNNLPGIC
101: AQLPGRTDNE IKNYWNTRLK RFQRQGLPLY PPEYSQNNHQ QQMYPQQPSS PLPSQTPASS FTFPLLQPPS LCPKRCYNTA FSPKASYISS PTNFLVSSPT
201: FLHTHSSLSS YQSTNPVYSM KHELSSNQIP YSASLGVYQV SKFSDNGDCN QNLNTGLHTN TCQLLEDLME EAEALADSFR APKRRQIMAA LEDNNNNNNF
301: FSGGFGHRVS SNSLCSLQGL TPKEDESLQM NTMQDEDITK LLDWGSESEE ISNGQSSVIT TENNLVLDDH QFAFLFPVDD DTNNLPGIC
Arabidopsis Description
MYB97Transcription factor MYB97 [Source:UniProtKB/Swiss-Prot;Acc:Q9S773]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.