Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021791.1-P | Field mustard | nucleus | 83.56 | 95.62 |
| CDY15321 | Canola | nucleus | 94.82 | 93.97 |
| CDY48264 | Canola | nucleus | 74.77 | 69.31 |
| CDY12203 | Canola | nucleus | 74.55 | 68.81 |
| CDY68663 | Canola | nucleus | 59.68 | 57.99 |
| AT2G32460.1 | Thale cress | nucleus | 63.96 | 57.96 |
| CDY66700 | Canola | nucleus | 57.88 | 57.88 |
| CDY72198 | Canola | nucleus | 21.17 | 46.31 |
| CDY69320 | Canola | nucleus | 20.95 | 45.81 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 24.55 | 32.83 |
| PGSC0003DMT400036086 | Potato | nucleus | 34.23 | 31.93 |
| CDY67258 | Canola | nucleus | 30.41 | 31.4 |
| CDY19890 | Canola | nucleus | 30.18 | 31.24 |
| Zm00001d033075_P001 | Maize | nucleus | 26.13 | 31.18 |
| KRH22574 | Soybean | nucleus | 33.56 | 31.11 |
| KRH26778 | Soybean | nucleus | 33.11 | 30.82 |
| VIT_12s0059g00700.t01 | Wine grape | nucleus | 29.5 | 30.75 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 19.14 | 30.04 |
| CDY20794 | Canola | nucleus | 27.7 | 29.93 |
| PGSC0003DMT400074486 | Potato | nucleus | 32.43 | 29.75 |
| Solyc07g052300.2.1 | Tomato | nucleus | 32.21 | 29.42 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 27.7 | 29.15 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 25.45 | 28.97 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 27.7 | 28.87 |
| Zm00001d014364_P002 | Maize | nucleus | 26.13 | 28.86 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 27.48 | 28.57 |
| CDX83247 | Canola | nucleus | 27.7 | 28.28 |
| CDY38535 | Canola | nucleus | 27.03 | 27.78 |
| KXG38121 | Sorghum | nucleus | 28.38 | 27.57 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 24.77 | 27.5 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 24.77 | 27.5 |
| EER90224 | Sorghum | nucleus | 26.35 | 27.34 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 24.55 | 27.25 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 24.32 | 27.07 |
| Zm00001d013801_P001 | Maize | nucleus | 27.93 | 27.02 |
| CDY61426 | Canola | nucleus | 33.56 | 26.75 |
| Solyc12g005890.1.1 | Tomato | nucleus | 24.1 | 26.42 |
| Os06t0679400-01 | Rice | nucleus | 26.58 | 26.4 |
| CDY66041 | Canola | nucleus | 28.38 | 26.2 |
| CDY43016 | Canola | nucleus | 32.66 | 26.17 |
| CDY08526 | Canola | nucleus | 29.5 | 26.1 |
| CDY56849 | Canola | nucleus | 29.5 | 26.04 |
| CDY41164 | Canola | nucleus | 15.54 | 25.37 |
| CDX71809 | Canola | nucleus | 15.32 | 25.0 |
| CDX67827 | Canola | nucleus | 16.89 | 24.67 |
| CDY64759 | Canola | nucleus | 16.89 | 24.59 |
| CDX71481 | Canola | nucleus | 27.48 | 21.4 |
| Os03t0578900-00 | Rice | nucleus | 25.23 | 21.21 |
| Zm00001d036577_P001 | Maize | nucleus | 22.75 | 19.77 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078G1G8 | UniProt:A0A078G1G8 | EnsemblPlants:CDY19141 | ProteinID:CDY19141 |
| ProteinID:CDY19141.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00006425001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF918 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF28E2 | SEG:seg |
Description
BnaA04g18810DBnaA04g18810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1G8]
Coordinates
chrLK032092:-:460323..462236
Molecular Weight (calculated)
49658.8 Da
IEP (calculated)
5.756
GRAVY (calculated)
-0.741
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGGETSTA AKEARGLKKG PWTTTEDAIL TEYVRKRGEG NWNAVQKNSG LLRCGKSCRL RWANHLRPNL RKGSFTPDEE KIIIELHAKL GNKWARMASQ
101: LPGRTDNEIK NYWNTRMKRR QRAGLPLYPH EIQHLGIGND DEFEIRCFQF PNQDHPNHQN MIQYTNSSNT SPSSSSFSSS SSQPPKELCL DPLISTNPGL
201: NQIPNMFSPY NNSFENDNKQ FGFSLTFSSS SSSNELCNPD QLLELMSENL DTNVASKKDI DVLSLMGDHE TIPSYFSLGL DTTVLELPSN QTPCTSNIMH
301: DNNVHLDSPA GNSGLLDALL EESRALSRGG IFKDARVSSS GLCEFQDKRV KMDFENRLID HLSSSHQSSF ESNSNLYEKH NEATMLKATV DDDDDDMLKS
401: LLNSFPSTTP LPDWVEPHKP PPSSNVDPVA SLGSSYWRNI PRIC
101: LPGRTDNEIK NYWNTRMKRR QRAGLPLYPH EIQHLGIGND DEFEIRCFQF PNQDHPNHQN MIQYTNSSNT SPSSSSFSSS SSQPPKELCL DPLISTNPGL
201: NQIPNMFSPY NNSFENDNKQ FGFSLTFSSS SSSNELCNPD QLLELMSENL DTNVASKKDI DVLSLMGDHE TIPSYFSLGL DTTVLELPSN QTPCTSNIMH
301: DNNVHLDSPA GNSGLLDALL EESRALSRGG IFKDARVSSS GLCEFQDKRV KMDFENRLID HLSSSHQSSF ESNSNLYEKH NEATMLKATV DDDDDDMLKS
401: LLNSFPSTTP LPDWVEPHKP PPSSNVDPVA SLGSSYWRNI PRIC
001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
Arabidopsis Description
MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.