Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48264 | Canola | nucleus | 97.3 | 97.7 |
| Bra005597.1-P | Field mustard | nucleus | 96.67 | 97.08 |
| CDY19141 | Canola | nucleus | 68.81 | 74.55 |
| CDY15321 | Canola | nucleus | 69.23 | 74.33 |
| CDY68663 | Canola | nucleus | 56.55 | 59.52 |
| CDY66700 | Canola | nucleus | 54.05 | 58.56 |
| AT2G32460.1 | Thale cress | nucleus | 58.0 | 56.94 |
| CDY72198 | Canola | nucleus | 20.17 | 47.78 |
| CDY69320 | Canola | nucleus | 19.96 | 47.29 |
| PGSC0003DMT400036086 | Potato | nucleus | 31.39 | 31.72 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 21.83 | 31.63 |
| VIT_12s0059g00700.t01 | Wine grape | nucleus | 27.44 | 30.99 |
| Solyc07g052300.2.1 | Tomato | nucleus | 31.18 | 30.86 |
| KRH26778 | Soybean | nucleus | 30.56 | 30.82 |
| PGSC0003DMT400074486 | Potato | nucleus | 30.77 | 30.58 |
| KRH22574 | Soybean | nucleus | 30.35 | 30.48 |
| Zm00001d033075_P001 | Maize | nucleus | 23.49 | 30.38 |
| CDY67258 | Canola | nucleus | 26.82 | 30.0 |
| CDY19890 | Canola | nucleus | 26.61 | 29.84 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 17.26 | 29.33 |
| CDX83247 | Canola | nucleus | 26.2 | 28.97 |
| CDY20794 | Canola | nucleus | 24.74 | 28.95 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 25.36 | 28.91 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 25.36 | 28.64 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 25.36 | 28.57 |
| CDY38535 | Canola | nucleus | 25.57 | 28.47 |
| Zm00001d014364_P002 | Maize | nucleus | 23.7 | 28.36 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 22.87 | 28.21 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 22.66 | 27.25 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 22.45 | 27.0 |
| EER90224 | Sorghum | nucleus | 23.91 | 26.87 |
| CDY08526 | Canola | nucleus | 27.65 | 26.49 |
| CDY56849 | Canola | nucleus | 27.65 | 26.44 |
| CDY66041 | Canola | nucleus | 26.4 | 26.4 |
| Zm00001d013801_P001 | Maize | nucleus | 25.16 | 26.36 |
| KXG38121 | Sorghum | nucleus | 24.95 | 26.26 |
| Solyc12g005890.1.1 | Tomato | nucleus | 22.04 | 26.17 |
| CDY41164 | Canola | nucleus | 14.76 | 26.1 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 21.62 | 26.07 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 21.62 | 26.0 |
| CDX71809 | Canola | nucleus | 14.55 | 25.74 |
| Os06t0679400-01 | Rice | nucleus | 23.91 | 25.73 |
| CDY61426 | Canola | nucleus | 29.73 | 25.67 |
| CDY43016 | Canola | nucleus | 29.11 | 25.27 |
| CDX67827 | Canola | nucleus | 15.8 | 25.0 |
| CDY64759 | Canola | nucleus | 15.18 | 23.93 |
| CDX71481 | Canola | nucleus | 26.4 | 22.28 |
| Os03t0578900-00 | Rice | nucleus | 23.49 | 21.4 |
| Zm00001d036577_P001 | Maize | nucleus | 20.79 | 19.57 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078FJ92 | UniProt:A0A078FJ92 | EnsemblPlants:CDY12203 | ProteinID:CDY12203 |
| ProteinID:CDY12203.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00061222001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF918 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE0DA7 | SEG:seg |
Description
BnaC04g12330DBnaC04g12330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJ92]
Coordinates
chrLK032018:+:392590..394677
Molecular Weight (calculated)
54274.7 Da
IEP (calculated)
5.208
GRAVY (calculated)
-0.872
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGGETRVT ETKVRGMKKG PWTTTEDAIL TEYVRKHGEG NWNAVQKNSG LFRCGKSCRL RWANHLRPNL KKGSFSPDEE KMIIELHARL GNKWARMASQ
101: LPGRTDNEIK NYWNTRMKRR QRDGLPLYPQ ETQHQGIGND DEFEFNSSQF QNQDHGNHQN MFQYAYSSNT PSSSSSFSSS SSQPSKRLCL DPLISSNPGL
201: NQIPESPMNF SMFSLYNNSL ENDHSLDNDK NQFLKYSSSS SNEFCNLNQL LEVPSENSDT NNTNKKDIDA MSYSSLLMGD HETRPSCFPF GLDNAVLELP
301: SSSKTPTHWF TSNTILDDGV PLDPPAGNSG LLDAVLEESQ ALSRRGNYND FTVSLSDLGE DQDKRVKMDC ANRLINHNPS HLSSFETYPN IYKRYNEPTM
401: EKAIVDDDDD ILMSLLNNFP STTLLPDDWY GMKDIQTGVS QSGNHQDNKR VELHKAPPSP NTVDPLASLG SCYWDNMPSI F
101: LPGRTDNEIK NYWNTRMKRR QRDGLPLYPQ ETQHQGIGND DEFEFNSSQF QNQDHGNHQN MFQYAYSSNT PSSSSSFSSS SSQPSKRLCL DPLISSNPGL
201: NQIPESPMNF SMFSLYNNSL ENDHSLDNDK NQFLKYSSSS SNEFCNLNQL LEVPSENSDT NNTNKKDIDA MSYSSLLMGD HETRPSCFPF GLDNAVLELP
301: SSSKTPTHWF TSNTILDDGV PLDPPAGNSG LLDAVLEESQ ALSRRGNYND FTVSLSDLGE DQDKRVKMDC ANRLINHNPS HLSSFETYPN IYKRYNEPTM
401: EKAIVDDDDD ILMSLLNNFP STTLLPDDWY GMKDIQTGVS QSGNHQDNKR VELHKAPPSP NTVDPLASLG SCYWDNMPSI F
001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
Arabidopsis Description
MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.