Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g052300.2.1 | Tomato | nucleus | 92.15 | 91.77 |
| PGSC0003DMT400036086 | Potato | nucleus | 34.92 | 35.5 |
| Bra021791.1-P | Field mustard | nucleus | 27.27 | 34.02 |
| Zm00001d033075_P001 | Maize | nucleus | 25.21 | 32.8 |
| KRH26778 | Soybean | nucleus | 32.23 | 32.7 |
| CDY19141 | Canola | nucleus | 29.75 | 32.43 |
| VIT_12s0059g00700.t01 | Wine grape | nucleus | 28.31 | 32.16 |
| KRH22574 | Soybean | nucleus | 31.82 | 32.15 |
| CDY15321 | Canola | nucleus | 29.75 | 32.14 |
| CDY66700 | Canola | nucleus | 29.34 | 31.98 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 21.9 | 31.93 |
| AT2G32460.1 | Thale cress | nucleus | 32.23 | 31.84 |
| CDY68663 | Canola | nucleus | 29.96 | 31.73 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 27.69 | 31.38 |
| Bra022888.1-P | Field mustard | nucleus | 29.34 | 31.07 |
| Bra005597.1-P | Field mustard | nucleus | 30.58 | 30.9 |
| CDY48264 | Canola | nucleus | 30.58 | 30.9 |
| CDY12203 | Canola | nucleus | 30.58 | 30.77 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 26.45 | 30.33 |
| KXG38121 | Sorghum | nucleus | 28.51 | 30.2 |
| PGSC0003DMT400015156 | Potato | nucleus | 30.99 | 29.88 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 26.24 | 29.81 |
| Zm00001d014364_P002 | Maize | nucleus | 24.38 | 29.35 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 23.97 | 29.07 |
| Zm00001d013801_P001 | Maize | nucleus | 27.48 | 28.98 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 16.94 | 28.98 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 23.35 | 28.97 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 23.76 | 28.75 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 23.76 | 28.75 |
| PGSC0003DMT400058426 | Potato | nucleus | 30.99 | 28.68 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 23.35 | 28.25 |
| Os06t0679400-01 | Rice | nucleus | 25.62 | 27.74 |
| EER90224 | Sorghum | nucleus | 24.17 | 27.34 |
| PGSC0003DMT400070549 | Potato | nucleus | 26.24 | 26.19 |
| PGSC0003DMT400066066 | Potato | nucleus | 14.46 | 22.88 |
| Os03t0578900-00 | Rice | nucleus | 24.17 | 22.16 |
| Zm00001d036577_P001 | Maize | nucleus | 22.52 | 21.33 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102586262 | MapMan:15.5.2.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1CTR2 | InterPro:Myb_dom |
| PFAM:PF00249 | EnsemblPlantsGene:PGSC0003DMG400028949 | PGSC:PGSC0003DMG400028949 | EnsemblPlants:PGSC0003DMT400074486 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF475 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000295A48F | RefSeq:XP_006366585.1 |
| SEG:seg | : | : | : | : | : |
Description
Protein 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400028949]
Coordinates
chr7:+:46885787..46889699
Molecular Weight (calculated)
53622.5 Da
IEP (calculated)
6.646
GRAVY (calculated)
-0.778
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPDDRGMRN GGGTRQALKK GPWTAGEDAI LMDYVKKHGE GNWNAVQRNS GLMRCGKSCR LRWANHLRPH LKKGAFTPEE ERIIIDLHAK LGNKWARMAA
101: QLPGRTDNEI KNYWNTRLKR RQRAGLPIYP QELQSQNQQE NNQPQSLISS PFDHPQRATY NNPPPLSLLN VFNPSTMRPS ITHQFPLSSN TIFRNPPKGL
201: PLTLPSSLSN SPFLSSMPNN NFGHTLSNLI PMSSFQQNYP NFSLTTRPFM GIPSNQNELM SGIGINSINY PSGPSLMTAS SSENTCSDFG SSDANNYANV
301: GLSQGNSGLL EDLLKGAQNL SRSTKNEENN NLDLNEKGKS LWQDYGLVGN HQDEAILTEE SVYSFAHGGD VNLNNSSESS STDPNASSGI FLRKEGSLQG
401: INQVDEHIMC LLNNYPLDQE PVPNWYDESD DKKINSKIGA DDHKAESLVE DSSKSQVAIT TTSGPKQHDW ELGGCCWNNM PPFC
101: QLPGRTDNEI KNYWNTRLKR RQRAGLPIYP QELQSQNQQE NNQPQSLISS PFDHPQRATY NNPPPLSLLN VFNPSTMRPS ITHQFPLSSN TIFRNPPKGL
201: PLTLPSSLSN SPFLSSMPNN NFGHTLSNLI PMSSFQQNYP NFSLTTRPFM GIPSNQNELM SGIGINSINY PSGPSLMTAS SSENTCSDFG SSDANNYANV
301: GLSQGNSGLL EDLLKGAQNL SRSTKNEENN NLDLNEKGKS LWQDYGLVGN HQDEAILTEE SVYSFAHGGD VNLNNSSESS STDPNASSGI FLRKEGSLQG
401: INQVDEHIMC LLNNYPLDQE PVPNWYDESD DKKINSKIGA DDHKAESLVE DSSKSQVAIT TTSGPKQHDW ELGGCCWNNM PPFC
001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
Arabidopsis Description
MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.