Factsheet for Bra022888.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68663	Canola	nucleus	99.12	99.12
AT2G32460.1	Thale cress	nucleus	77.68	72.45
Bra021791.1-P	Field mustard	nucleus	49.89	58.76
Bra005597.1-P	Field mustard	nucleus	58.42	55.74
HORVU7Hr1G105450.1	Barley	nucleus	23.19	31.93
PGSC0003DMT400036086	Potato	nucleus	32.39	31.09
VIT_12s0059g00700.t01	Wine grape	nucleus	27.57	29.58
PGSC0003DMT400074486	Potato	nucleus	31.07	29.34
Zm00001d033075_P001	Maize	nucleus	23.85	29.3
Solyc07g052300.2.1	Tomato	nucleus	31.07	29.22
Bra000531.1-P	Field mustard	nucleus	27.79	29.2
KRH26778	Soybean	nucleus	29.76	28.51
Bra002042.1-P	Field mustard	nucleus	29.1	28.3
KRH22574	Soybean	nucleus	29.32	27.97
Zm00001d014364_P002	Maize	nucleus	24.51	27.86
HORVU7Hr1G105520.2	Barley	nucleus	23.41	27.44
TraesCS4A01G467100.1	Wheat	nucleus	16.63	26.86
TraesCS6D01G126900.1	Wheat	nucleus	23.41	26.82
HORVU6Hr1G026450.1	Barley	nucleus	23.41	26.75
TraesCS7D01G446700.1	Wheat	nucleus	23.41	26.75
Bra034842.1-P	Field mustard	nucleus	30.2	26.69
EER90224	Sorghum	nucleus	24.95	26.64
TraesCS7B01G357900.1	Wheat	nucleus	23.19	26.5
TraesCS7B01G031000.1	Wheat	nucleus	24.29	26.3
TraesCS7D01G130100.1	Wheat	nucleus	24.51	26.29
HORVU7Hr1G027370.1	Barley	nucleus	24.51	26.23
Bra028997.1-P	Field mustard	nucleus	31.29	25.86
Os06t0679400-01	Rice	nucleus	24.73	25.28
Bra035547.1-P	Field mustard	nucleus	29.76	25.09
Bra002938.1-P	Field mustard	nucleus	31.51	25.04
Solyc12g005890.1.1	Tomato	nucleus	22.1	24.94
Zm00001d013801_P001	Maize	nucleus	24.73	24.62
KXG38121	Sorghum	nucleus	24.51	24.51
Bra003413.1-P	Field mustard	nucleus	15.32	24.05
Bra007536.1-P	Field mustard	nucleus	14.0	23.79
Os03t0578900-00	Rice	nucleus	23.63	20.45
Zm00001d036577_P001	Maize	nucleus	21.23	18.98

Protein Annotations

EnsemblPlants:Bra022888.1	EnsemblPlants:Bra022888.1-P	EnsemblPlantsGene:Bra022888	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF918	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002540399	UniProt:M4E288	MapMan:15.5.2.1	:	:

Description

AT2G32460 (E=2e-091) MYB101, ATMYB101, ATM1 | MYB101; DNA binding / transcription factor

Coordinates

chrA03:-:7582530..7584338

Molecular Weight (calculated)

51189.4 Da

IEP (calculated)

6.326

GRAVY (calculated)

-0.747

Length

457 amino acids

Sequence
(BLAST)

001: MHGGGETTAT ATEARGLKKG SWTTTEDAIL TEYVRKHGEG NWNAVQKNSG LLRCGKSCRL RWANHLRPNL KKGSFSPDEE KIIIELHAKM GNKWARMASQ
101: LPGRTDNEIK NYWNTRMKRR QRAGLPLSPH EIHHQGIDND DEFEFNSFQF SNQDHSNHQN MIQYTSSSNT PSPSSSFSSS SSQPQKNMCL DPLIYTNPSL
201: NHIPETPMNT HMFSLHNNSL ENENNQFGFS LSLSSSSSSN EFCTKKDTDA MSYSSFLMRD HEMRPSSFPL GLDNAVLELP SVQTTTHFRS YNTIIDNGVH
301: LYPPAGNSGL LDTVLEESRA LSRGGIFKDV TVSSSSLCED QDKRVEIDFE NRLIDHLNSS HQSSSETTPN LYKRYNEPTI VKTTMDDDDG ILLSFINNFP
401: STTPLRDDWY RVTEIQTEAL TSGILIGNHQ GNSKLEPQKA PPSSGTVDPL ALLGSCY

Best Arabidopsis Sequence Match ( AT2G32460.1 )
(BLAST)

001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC

Arabidopsis Description

MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.