Factsheet for Bra034842.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08526	Canola	nucleus	96.33	99.2
CDY56849	Canola	nucleus	95.36	98.01
AT3G11440.1	Thale cress	nucleus	79.5	74.32
Bra002042.1-P	Field mustard	nucleus	66.15	72.77
GSMUA_Achr7P21550_001	Banana	nucleus	13.73	53.79
GSMUA_Achr10P...	Banana	nucleus	29.79	39.9
KRH20589	Soybean	nucleus	40.23	39.02
VIT_13s0067g01630.t01	Wine grape	nucleus	42.17	39.0
KRH13249	Soybean	nucleus	39.27	38.09
KRH56248	Soybean	nucleus	36.36	36.58
KRH62709	Soybean	nucleus	35.01	35.49
Zm00001d033075_P001	Maize	nucleus	24.95	34.68
HORVU7Hr1G105450.1	Barley	nucleus	21.08	32.83
GSMUA_Achr1P17150_001	Banana	nucleus	37.14	32.76
TraesCS7B01G031000.1	Wheat	nucleus	26.11	31.99
HORVU7Hr1G027370.1	Barley	nucleus	26.31	31.85
TraesCS7D01G130100.1	Wheat	nucleus	26.11	31.69
GSMUA_AchrUn_...	Banana	nucleus	35.01	31.64
KXG38121	Sorghum	nucleus	27.85	31.51
TraesCS4A01G467100.1	Wheat	nucleus	17.21	31.45
Bra021791.1-P	Field mustard	nucleus	23.21	30.93
Bra022888.1-P	Field mustard	nucleus	26.69	30.2
Zm00001d013801_P001	Maize	nucleus	26.5	29.85
HORVU7Hr1G105520.2	Barley	nucleus	22.44	29.74
Bra000531.1-P	Field mustard	nucleus	24.76	29.43
HORVU6Hr1G026450.1	Barley	nucleus	22.63	29.25
TraesCS7B01G357900.1	Wheat	nucleus	22.44	29.0
TraesCS7D01G446700.1	Wheat	nucleus	22.44	29.0
Zm00001d014364_P002	Maize	nucleus	22.05	28.36
TraesCS6D01G126900.1	Wheat	nucleus	21.86	28.32
EER90224	Sorghum	nucleus	23.21	28.04
Bra005597.1-P	Field mustard	nucleus	25.53	27.56
Bra007536.1-P	Field mustard	nucleus	14.12	27.14
Os06t0679400-01	Rice	nucleus	22.63	26.17
Bra003413.1-P	Field mustard	nucleus	14.7	26.12
GSMUA_Achr7P02510_001	Banana	nucleus	27.85	25.67
GSMUA_Achr7P21560_001	Banana	nucleus	21.28	25.23
Bra028997.1-P	Field mustard	nucleus	26.11	24.41
Bra002938.1-P	Field mustard	nucleus	26.89	24.17
Os03t0578900-00	Rice	nucleus	24.18	23.67
Bra035547.1-P	Field mustard	nucleus	24.18	23.06
Zm00001d036577_P001	Maize	nucleus	21.47	21.72

Protein Annotations

EnsemblPlants:Bra034842.1	EnsemblPlants:Bra034842.1-P	EnsemblPlantsGene:Bra034842	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF938	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000254763E	UniProt:M4F196	MapMan:15.5.2.1	:	:

Description

AT3G11440 (E=2e-184) ATMYB65, MYB65 | MYB65 (MYB DOMAIN PROTEIN 65); DNA binding / transcription factor

Coordinates

chrA05:-:21667479..21669191

Molecular Weight (calculated)

57295.3 Da

IEP (calculated)

5.725

GRAVY (calculated)

-0.513

Length

517 amino acids

Sequence
(BLAST)

001: MSYTAESDDD GMHSPAGDSI GYGCKSRGKG SVLKKGPWTS TEDGILINYV RKHGEGNWNA VQKYTSLARC GKSCRLRWAN HLRPNLKKGA FSQEEERLIV
101: QMHAKMGNKW AQMAEHLPGR TDNEIKNYWN TRIKRRHRAG LPLYPPELHV EDLQWSEEYI TSNVTRVNRR RHHQDILQLG NSKADVLFDD LNFATSLLPG
201: ASDVLDMFTC NMLGTGASSS PYESYMPPIL PSPKQLRESG SLFPMCSSNI KQEFHSPEPF QNPRSCSISP CDVGHHSPYG NQHPSDVMIS DSHAFTDGML
301: PTSKPLFGAV KLELPSFQYS ETSGFDQWKT TPSPPHSDPL DSVDAYIQSP PPLEIEKDES NCFSSCDTGL LDMLLPNAKI KTSAKRSLAL PEIPIPTQLS
401: AGENSPVAVL WLRVALSYFV EDSAGNVVKT EELDQVWEPK RVDITRPDVL LASSWLDQQG CFGIVRDSSN MSDALALLLG GEDIENSYVT VGSSSSGQAQ
501: QGVESCTWTN MPPVWSL

Best Arabidopsis Sequence Match ( AT3G11440.3 )
(BLAST)

001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL

Arabidopsis Description

ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.