CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62709	Soybean	nucleus	92.61	93.33
KRH13249	Soybean	nucleus	64.01	61.73
KRH20589	Soybean	nucleus	63.23	60.98
GSMUA_Achr7P21550_001	Banana	nucleus	14.79	57.58
CDY72198	Canola	nucleus	20.82	52.71
CDY69320	Canola	nucleus	20.62	52.22
VIT_13s0067g01630.t01	Wine grape	nucleus	56.23	51.7
GSMUA_Achr10P...	Banana	nucleus	35.41	47.15
KRH18640	Soybean	nucleus	40.47	38.95
KRG89766	Soybean	nucleus	39.11	38.58
GSMUA_Achr1P17150_001	Banana	nucleus	43.39	38.05
CDY08526	Canola	nucleus	36.58	37.45
CDY56849	Canola	nucleus	36.58	37.38
AT5G06100.4	Thale cress	nucleus	37.35	36.92
Bra034842.1-P	Field mustard	nucleus	36.58	36.36
Bra002042.1-P	Field mustard	nucleus	32.88	35.96
GSMUA_AchrUn_...	Banana	nucleus	39.69	35.66
AT3G11440.1	Thale cress	nucleus	38.33	35.62
CDY66041	Canola	nucleus	32.88	35.14
Zm00001d033075_P001	Maize	nucleus	24.9	34.41
HORVU7Hr1G105450.1	Barley	nucleus	21.98	34.04
HORVU7Hr1G027370.1	Barley	nucleus	27.43	33.02
TraesCS4A01G467100.1	Wheat	nucleus	17.7	32.16
TraesCS7B01G031000.1	Wheat	nucleus	26.26	31.99
TraesCS7D01G130100.1	Wheat	nucleus	26.46	31.92
KRH46196	Soybean	nucleus	22.37	31.34
KRH14648	Soybean	extracellular, golgi	20.43	30.88
KRH46194	Soybean	nucleus	27.43	30.85
HORVU7Hr1G105520.2	Barley	nucleus	22.76	30.0
HORVU6Hr1G026450.1	Barley	nucleus	23.35	30.0
KRH26778	Soybean	nucleus	27.82	29.98
TraesCS7D01G446700.1	Wheat	nucleus	23.15	29.75
Zm00001d014364_P002	Maize	nucleus	23.15	29.6
TraesCS6D01G126900.1	Wheat	nucleus	22.96	29.57
KXG38121	Sorghum	nucleus	26.26	29.54
TraesCS7B01G357900.1	Wheat	nucleus	22.96	29.5
KRH22574	Soybean	nucleus	27.43	29.44
KRH46191	Soybean	nucleus	26.07	29.07
Zm00001d013801_P001	Maize	nucleus	25.88	28.98
EER90224	Sorghum	nucleus	23.93	28.74
KRH27535	Soybean	nucleus	16.54	28.24
KRG98748	Soybean	nucleus	28.79	27.98
GSMUA_Achr7P21560_001	Banana	nucleus	23.54	27.75
KRH48761	Soybean	nucleus	16.73	27.74
Os06t0679400-01	Rice	nucleus	24.12	27.74
KRH36402	Soybean	nucleus	16.34	27.45
KRH66578	Soybean	nucleus	16.54	27.33
GSMUA_Achr7P02510_001	Banana	nucleus	29.18	26.74
Os03t0578900-00	Rice	nucleus	25.29	24.62
Zm00001d036577_P001	Maize	nucleus	22.37	22.5

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100805804	MapMan:15.5.2.1	EMBL:ACUP02004108	EnsemblPlantsGene:GLYMA_06G312900	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7KYG3	EnsemblPlants:KRH56248	ProteinID:KRH56248
ProteinID:KRH56248.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF938
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00029488DE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:50144740..50148170

Molecular Weight (calculated)

56772.3 Da

IEP (calculated)

4.745

GRAVY (calculated)

-0.698

Length

514 amino acids

Sequence
(BLAST)

001: MSQMTNEVDN NVHYDDQTGS QLNDDGNGVG VVLKKGPWTA AEDALLVNYV QKHGEGNWNA VQNYSGLSRC GKSCRLRWAN HLRPNLKKGA FTAEEERMIA
101: ELHAKMGNKW ARMAAHLPGR TDNEIKNYWN TRMKRRRRAG LPLYPPEVLL QAFQERKHGQ GTGEISDGDG GHRDFLKKNN YEIHDAIFDS LKENQGILPF
201: LPDLPAISAN SFLPNGLGSP PYCNLLPSTL PNHDHLQEST MSFIGSSELN SNRFYPFDHI KDNTSDKISE SFGLYSPLDR GVSHGSICYS HSLSNGNSST
301: SKPTSEAVKS ELPSLQIPET EFGSWGTSPP PPLNESLDVF IHSPQPPNAL DSGSSSPLNS GLLDALLYQA NTLGCSKNNS SDKSSNSSIA TPGDRAECSA
401: LNMYETEWED YADPLSPFGA TSILNEHPVV STNGNSWDEW ELFQTFSENS AGNNERLQSI DQVWTPKSEN QSMSLLNFTL PDVLITSDWH ELYSDHDSTN
501: QAIMTEASDD ISGQ

Best Arabidopsis Sequence Match ( AT3G11440.1 )
(BLAST)

001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL

Arabidopsis Description

ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.