CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46191	Soybean	nucleus	86.21	85.47
KRH46196	Soybean	nucleus	59.52	74.11
KRG98748	Soybean	nucleus	85.34	73.72
HORVU7Hr1G105450.1	Barley	nucleus	23.85	32.83
Zm00001d033075_P001	Maize	nucleus	26.48	32.53
KRH14648	Soybean	extracellular, golgi	23.41	31.47
TraesCS7B01G357900.1	Wheat	nucleus	27.13	31.0
HORVU7Hr1G105520.2	Barley	nucleus	26.26	30.77
TraesCS7D01G446700.1	Wheat	nucleus	26.48	30.25
TraesCS4A01G467100.1	Wheat	nucleus	18.6	30.04
HORVU7Hr1G027370.1	Barley	nucleus	28.01	29.98
TraesCS7D01G130100.1	Wheat	nucleus	27.35	29.34
TraesCS7B01G031000.1	Wheat	nucleus	26.91	29.15
Zm00001d014364_P002	Maize	nucleus	25.6	29.1
EER90224	Sorghum	nucleus	26.91	28.74
KXG38121	Sorghum	nucleus	28.67	28.67
VIT_19s0090g00590.t01	Wine grape	nucleus	29.1	28.66
Zm00001d013801_P001	Maize	nucleus	28.45	28.32
HORVU6Hr1G026450.1	Barley	nucleus	24.29	27.75
Os06t0679400-01	Rice	nucleus	27.13	27.74
KRH13249	Soybean	nucleus	32.17	27.58
KRH56248	Soybean	nucleus	30.85	27.43
KRH20589	Soybean	nucleus	31.95	27.39
KRH62709	Soybean	nucleus	30.42	27.25
TraesCS6D01G126900.1	Wheat	nucleus	23.63	27.07
KRH26778	Soybean	nucleus	27.35	26.21
KRH22574	Soybean	nucleus	27.35	26.1
KRG89766	Soybean	nucleus	29.1	25.53
KRH48761	Soybean	nucleus	17.29	25.48
KRH18640	Soybean	nucleus	29.54	25.28
KRH27535	Soybean	nucleus	16.41	24.92
KRH66578	Soybean	nucleus	16.63	24.44
KRH36402	Soybean	nucleus	15.97	23.86
Os03t0578900-00	Rice	nucleus	26.26	22.73
Zm00001d036577_P001	Maize	nucleus	24.51	21.92

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EMBL:ACUP02005328	EnsemblPlantsGene:GLYMA_08G317600	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7LA48	EnsemblPlants:KRH46194	ProteinID:KRH46194	ProteinID:KRH46194.1
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF938	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002953B09	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:43709348..43712385

Molecular Weight (calculated)

50471.7 Da

IEP (calculated)

6.985

GRAVY (calculated)

-0.763

Length

457 amino acids

Sequence
(BLAST)

001: MEGMANISDD ASNGENGFLA MFGGDESGGG GSGGVGSGGD QGGGNVEDVA LKKGPWTTAE DVILMDYVTK NGEGNWNAVQ RKTGLNRCGK SCRLRWANHL
101: RPNLKKGAFS PEEEKLIVDL HAQFGNKWTR MAALLPGRTD NEIKNCWNTR IKRRQRQGLP LYSDEHDQHH RSTTPTPSNH TFPMPHPNRI KPQHCHNSPL
201: QHRQPFTSSS PHNFLDHSPL PLSSSSSPSP LSFTFQRSAP MLSTTLRFKH YCASPSYNNL SDPPLTTQFP HLDGFRFPVS SGFSQFFQPS LLDSDRGVSS
301: SSSSLAFQPK LELPLSQYYK PPEEQDIKLD IEFNDPSFQS SSSGLMGDLL FEAQAMALGK NSKKRGYLKP KPKEEAPDFS KFMNEDLSSL LTVISSSNMQ
401: GHECHNNSAR EVSNVQSSGS GMTDDNFGLD IKPIASLFPL SNTRNHDENQ GCYSWDN

Best Arabidopsis Sequence Match ( AT4G26930.1 )
(BLAST)

001: MIVYGGGASE DGEGGGVVLK KGPWTVAEDE TLAAYVREYG EGNWNSVQKK TWLARCGKSC RLRWANHLRP NLRKGSFTPE EERLIIQLHS QLGNKWARMA
101: AQLPGRTDNE IKNYWNTRLK RFQRQGLPLY PPEYSQNNHQ QQMYPQQPSS PLPSQTPASS FTFPLLQPPS LCPKRCYNTA FSPKASYISS PTNFLVSSPT
201: FLHTHSSLSS YQSTNPVYSM KHELSSNQIP YSASLGVYQV SKFSDNGDCN QNLNTGLHTN TCQLLEDLME EAEALADSFR APKRRQIMAA LEDNNNNNNF
301: FSGGFGHRVS SNSLCSLQGL TPKEDESLQM NTMQDEDITK LLDWGSESEE ISNGQSSVIT TENNLVLDDH QFAFLFPVDD DTNNLPGIC

Arabidopsis Description

MYB97Transcription factor MYB97 [Source:UniProtKB/Swiss-Prot;Acc:Q9S773]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.