Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48761 | Soybean | nucleus | 91.0 | 91.29 |
| HORVU7Hr1G051740.1 | Barley | nucleus | 31.51 | 59.39 |
| VIT_15s0021g02040.t01 | Wine grape | nucleus | 56.91 | 57.28 |
| Bra007536.1-P | Field mustard | nucleus | 46.95 | 54.28 |
| CDX71809 | Canola | nucleus | 47.27 | 54.04 |
| CDY41164 | Canola | nucleus | 46.95 | 53.68 |
| Os06t0118150-00 | Rice | nucleus | 16.72 | 52.0 |
| AT3G60460.1 | Thale cress | nucleus | 48.87 | 50.67 |
| PGSC0003DMT400066066 | Potato | nucleus | 49.2 | 50.0 |
| Bra003413.1-P | Field mustard | nucleus | 46.3 | 49.48 |
| Solyc10g019260.1.1 | Tomato | nucleus | 48.23 | 49.34 |
| CDY64759 | Canola | nucleus | 48.23 | 49.18 |
| CDX67827 | Canola | nucleus | 47.59 | 48.68 |
| Solyc01g090530.1.1 | Tomato | nucleus | 48.55 | 47.34 |
| KRH27535 | Soybean | nucleus | 41.16 | 42.52 |
| KRH36402 | Soybean | nucleus | 41.48 | 42.16 |
| TraesCS2B01G434400.1 | Wheat | nucleus | 42.77 | 40.18 |
| TraesCS2A01G415400.1 | Wheat | nucleus | 42.77 | 40.06 |
| Zm00001d031515_P001 | Maize | nucleus | 37.62 | 39.8 |
| TraesCS2D01G412500.1 | Wheat | nucleus | 42.44 | 39.76 |
| EES15365 | Sorghum | nucleus | 38.26 | 38.51 |
| Zm00001d002750_P001 | Maize | nucleus | 41.16 | 37.21 |
| Zm00001d026186_P001 | Maize | nucleus | 39.23 | 35.26 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 35.69 | 34.47 |
| EES11224 | Sorghum | nucleus | 40.84 | 33.6 |
| TraesCS7A01G251700.1 | Wheat | nucleus | 37.3 | 32.49 |
| TraesCS7B01G139400.1 | Wheat | nucleus | 36.98 | 32.39 |
| KRH14648 | Soybean | extracellular, golgi | 22.83 | 20.88 |
| KRH26778 | Soybean | nucleus | 26.37 | 17.19 |
| KRH46196 | Soybean | nucleus | 20.26 | 17.17 |
| KRH46191 | Soybean | nucleus | 25.08 | 16.92 |
| KRH13249 | Soybean | nucleus | 28.94 | 16.89 |
| KRH22574 | Soybean | nucleus | 25.72 | 16.7 |
| KRH18640 | Soybean | nucleus | 28.62 | 16.67 |
| KRH46194 | Soybean | nucleus | 24.44 | 16.63 |
| KRH56248 | Soybean | nucleus | 27.33 | 16.54 |
| KRG89766 | Soybean | nucleus | 27.65 | 16.51 |
| KRH62709 | Soybean | nucleus | 27.01 | 16.47 |
| KRH20589 | Soybean | nucleus | 27.97 | 16.32 |
| KRG98748 | Soybean | nucleus | 25.4 | 14.93 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100805384 | MapMan:15.5.2.1 | EMBL:ACUP02001984 | EnsemblPlantsGene:GLYMA_03G115400 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7KEG5 | EnsemblPlants:KRH66578 | ProteinID:KRH66578 |
| ProteinID:KRH66578.1 | InterPro:Myb_dom | PFAM:PF13921 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF488 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00023377A5 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:32326735..32328801
Molecular Weight (calculated)
35627.0 Da
IEP (calculated)
5.032
GRAVY (calculated)
-0.635
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MHGKKEQEEY IRKGQWEAEE DEVLLNHVKK YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SLEEERVVIE LQAQFGNRWA KIASYLPGRT
101: DNDVKNFWSS RQKRLARILQ TSATTFRSQK NKTKVPSFLD VPTLEAPKFS SSSEGEPSSK PQTCTLPYID NSEVIQMVSL PDLIKSELPS SDTIHVEQEF
201: TLFENYKSTE QIAFPQIPEL QNGLTFSMEN QDLVPTIEEP CFIEDLCPFD VSEFGIGPQH PFGFPFFEPP GSCRFGTRDA IDNFKISDSF FDDLPVDMFD
301: HMDPPASPSN L
101: DNDVKNFWSS RQKRLARILQ TSATTFRSQK NKTKVPSFLD VPTLEAPKFS SSSEGEPSSK PQTCTLPYID NSEVIQMVSL PDLIKSELPS SDTIHVEQEF
201: TLFENYKSTE QIAFPQIPEL QNGLTFSMEN QDLVPTIEEP CFIEDLCPFD VSEFGIGPQH PFGFPFFEPP GSCRFGTRDA IDNFKISDSF FDDLPVDMFD
301: HMDPPASPSN L
001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
Arabidopsis Description
DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.