CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22574	Soybean	nucleus	90.78	90.4
Bra021791.1-P	Field mustard	nucleus	27.04	33.25
CDY19141	Canola	nucleus	30.82	33.11
CDY15321	Canola	nucleus	30.61	32.59
AT2G32460.1	Thale cress	nucleus	33.12	32.24
PGSC0003DMT400074486	Potato	nucleus	32.7	32.23
HORVU7Hr1G105450.1	Barley	nucleus	22.22	31.93
Solyc07g052300.2.1	Tomato	nucleus	32.08	31.48
CDY66700	Canola	nucleus	28.72	30.86
Bra005597.1-P	Field mustard	nucleus	30.82	30.69
CDY48264	Canola	nucleus	30.82	30.69
CDY12203	Canola	nucleus	30.82	30.56
VIT_12s0059g00700.t01	Wine grape	nucleus	27.04	30.28
PGSC0003DMT400036086	Potato	nucleus	30.19	30.25
CDY68663	Canola	nucleus	28.72	29.98
KRH13249	Soybean	nucleus	33.33	29.83
Bra022888.1-P	Field mustard	nucleus	28.51	29.76
KRH14648	Soybean	extracellular, golgi	21.17	29.71
KRH20589	Soybean	nucleus	33.12	29.64
KRH46196	Soybean	nucleus	22.64	29.43
TraesCS4A01G467100.1	Wheat	nucleus	17.4	29.33
Zm00001d033075_P001	Maize	nucleus	22.85	29.3
HORVU7Hr1G027370.1	Barley	nucleus	25.79	28.81
HORVU7Hr1G105520.2	Barley	nucleus	23.48	28.72
KRH62709	Soybean	nucleus	30.19	28.24
KRH46191	Soybean	nucleus	27.25	28.2
TraesCS7B01G031000.1	Wheat	nucleus	24.95	28.2
KRH48761	Soybean	nucleus	18.24	28.06
TraesCS7D01G446700.1	Wheat	nucleus	23.48	28.0
TraesCS7D01G130100.1	Wheat	nucleus	24.95	27.93
KRH56248	Soybean	nucleus	29.98	27.82
TraesCS7B01G357900.1	Wheat	nucleus	23.27	27.75
Zm00001d014364_P002	Maize	nucleus	23.27	27.61
TraesCS6D01G126900.1	Wheat	nucleus	23.06	27.57
HORVU6Hr1G026450.1	Barley	nucleus	23.06	27.5
KRH46194	Soybean	nucleus	26.21	27.35
Zm00001d013801_P001	Maize	nucleus	26.0	27.02
KXG38121	Sorghum	nucleus	25.58	26.7
KRG98748	Soybean	nucleus	29.56	26.65
EER90224	Sorghum	nucleus	23.9	26.64
KRH66578	Soybean	nucleus	17.19	26.37
KRG89766	Soybean	nucleus	27.67	25.34
Os06t0679400-01	Rice	nucleus	23.69	25.28
KRH18640	Soybean	nucleus	28.09	25.09
KRH27535	Soybean	nucleus	15.72	24.92
KRH36402	Soybean	nucleus	15.93	24.84
Solyc12g005890.1.1	Tomato	nucleus	20.55	24.2
Zm00001d036577_P001	Maize	nucleus	23.27	21.72
Os03t0578900-00	Rice	nucleus	22.43	20.27

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100798860	MapMan:15.5.2.1	EMBL:ACUP02007744	EnsemblPlantsGene:GLYMA_12G193300	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7LVW1	EnsemblPlants:KRH26778	ProteinID:KRH26778
ProteinID:KRH26778.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF938
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002953E4C	SEG:seg	:

Description

hypothetical protein

Coordinates

chr12:+:35478288..35482335

Molecular Weight (calculated)

52804.2 Da

IEP (calculated)

6.409

GRAVY (calculated)

-0.895

Length

477 amino acids

Sequence
(BLAST)

001: MCPMARTVSN SNETAAKEEG EVRNGVRKGP WTPEEDAILM DYVKKHGEGN WNSVQKNSGL LRCGKSCRLR WANHLRPNLK KGAFSQEEEQ VIIDLHSKLG
101: NKWARMAAQL PGRTDNEIKN FWNTRMKRRQ RAGLPLYPPE VHAEATSYLL QHHRYLEQQQ QQQPHSSSSF SLLLSSCYPN KLNDPNQTHH HSNANLLQSQ
201: PDHSANRYIN PSQQFKFSNE NSGSNGNFAF PLSPLSPYGS SSSTLLNHSF GGGDHGFIAG SPYEPFSLVQ GSTTDISSNQ TPTPASSYAS GVDGLMGASS
301: MVNNNNNNND YYEVAPLSPP QGNSGLLDAL VMEAQGLSHN EKSKSEEDPN LAGKLSCKRK KMEYAEEGGT VPAMKKNSGN STTNESQRDD DISSSQLAKG
401: KEQIGEDPLE EMNGMDDDLV SLLNHFPLEM PMPEWYRRGG NQSLGLENQP KASLPDPADQ EHAWTLGTCW NNMPRIC

Best Arabidopsis Sequence Match ( AT2G32460.1 )
(BLAST)

001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC

Arabidopsis Description

MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.