CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89766	Soybean	nucleus	84.08	86.18
VIT_06s0009g02480.t01	Wine grape	nucleus	49.63	50.57
Solyc06g073640.2.1	Tomato	nucleus	42.7	45.24
PGSC0003DMT400015156	Potato	nucleus	42.13	44.82
KRH13249	Soybean	nucleus	41.76	41.84
PGSC0003DMT400058426	Potato	nucleus	40.64	41.49
KRH20589	Soybean	nucleus	41.2	41.28
KRH62709	Soybean	nucleus	38.95	40.78
Solyc01g009070.2.1	Tomato	nucleus	40.82	40.6
KRH56248	Soybean	nucleus	38.95	40.47
CDY38535	Canola	nucleus	29.21	36.11
Bra000531.1-P	Field mustard	nucleus	29.4	36.09
CDX83247	Canola	nucleus	29.4	36.09
PGSC0003DMT400070549	Potato	nucleus	32.77	36.08
AT2G26960.1	Thale cress	nucleus	28.84	36.07
KRH14648	Soybean	extracellular, golgi	21.54	33.82
HORVU7Hr1G105450.1	Barley	nucleus	20.97	33.73
Zm00001d033075_P001	Maize	nucleus	23.03	33.06
AT2G26950.1	Thale cress	cytosol	22.66	31.68
Solyc11g072060.1.1	Tomato	nucleus	31.46	31.11
TraesCS4A01G467100.1	Wheat	nucleus	16.48	31.1
HORVU7Hr1G105520.2	Barley	nucleus	22.28	30.51
KRH46196	Soybean	nucleus	20.79	30.25
TraesCS7D01G446700.1	Wheat	nucleus	22.28	29.75
KRH48761	Soybean	nucleus	17.23	29.68
KRH46194	Soybean	nucleus	25.28	29.54
KRH46191	Soybean	nucleus	25.47	29.5
TraesCS7B01G357900.1	Wheat	nucleus	22.1	29.5
HORVU7Hr1G027370.1	Barley	nucleus	23.41	29.27
HORVU6Hr1G026450.1	Barley	nucleus	21.91	29.25
TraesCS6D01G126900.1	Wheat	nucleus	21.72	29.07
EER90224	Sorghum	nucleus	23.22	28.97
KRG98748	Soybean	nucleus	28.65	28.92
Zm00001d014364_P002	Maize	nucleus	21.72	28.86
KRH66578	Soybean	nucleus	16.67	28.62
TraesCS7B01G031000.1	Wheat	nucleus	22.47	28.44
CDX71481	Canola	nucleus	30.34	28.42
TraesCS7D01G130100.1	Wheat	nucleus	22.66	28.4
KRH26778	Soybean	nucleus	25.09	28.09
KRH22574	Soybean	nucleus	25.09	27.97
Zm00001d013801_P001	Maize	nucleus	23.97	27.89
KXG38121	Sorghum	nucleus	23.41	27.35
Os06t0679400-01	Rice	nucleus	22.66	27.07
KRH27535	Soybean	nucleus	14.61	25.91
KRH36402	Soybean	nucleus	14.61	25.49
Os03t0578900-00	Rice	nucleus	22.28	22.54
Zm00001d036577_P001	Maize	nucleus	21.54	22.5

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100800658	MapMan:15.5.2.1	UniProt:A0A0R0GJT2	EMBL:ACUP02008109	EnsemblPlantsGene:GLYMA_13G073400
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	EnsemblPlants:KRH18640	ProteinID:KRH18640
ProteinID:KRH18640.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF475
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0003DECE41	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:-:17553306..17565071

Molecular Weight (calculated)

59017.8 Da

IEP (calculated)

5.216

GRAVY (calculated)

-0.630

Length

534 amino acids

Sequence
(BLAST)

001: MNLQSCILTA MSSMTSGGDT RKISKGRWSS SLDEKVGVGG NVGGEGPLKK GPWTAAEDAI LVEYVKKHGQ GNWNAVQKHS GLARCGKSCR LRWANHLRPD
101: LKKGAFTAEE ENRILELHAK MGNKWARMAA ELPGRTDNEI KNYWNTRIKR MQRAGLPIYP EELCQRILNG NQESQNVGTM TNEACHHDDL SQTNNFDIPD
201: VEFKNFKFRH GLPHVPSIFD MPESSLFDQS SDSSHSYNFL FPTMRPTKRP RESEMLYDSF GSCSINAAPL FDQYGNYTFE KISDHPGLSL PCDPVLNTTD
301: QFHGDNLTGS HAALNGNASA SVPIFGAMKL ELPSLQYPET QHGSWGPPMS PLPSLESVDT LIQSPTLEPI LSDPISPQSS GLLEAIVYNS KSLKGSNNDL
401: LLQETIATAN EVANISTLNH SFQTEWDELG DPNSPLGQSA ASVLTDYTPV RMCSVDGYQS TETSQDHDDK HEAPTTQFPD SSSKKKILKQ VDYTQPDALL
501: DLGWFGNNTK YESDQFVQQD ALGALFGDNC QHQP

Best Arabidopsis Sequence Match ( AT5G06100.1 )
(BLAST)

001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C

Arabidopsis Description

MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.