Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000531.1-P | Field mustard | nucleus | 98.62 | 98.62 |
| CDY38535 | Canola | nucleus | 94.48 | 95.14 |
| AT2G26960.1 | Thale cress | nucleus | 60.23 | 61.36 |
| CDX71481 | Canola | nucleus | 73.1 | 55.79 |
| CDY69320 | Canola | nucleus | 20.46 | 43.84 |
| CDY72198 | Canola | nucleus | 20.46 | 43.84 |
| AT2G26950.1 | Thale cress | cytosol | 31.95 | 36.39 |
| VIT_06s0009g02480.t01 | Wine grape | nucleus | 38.62 | 32.06 |
| PGSC0003DMT400015156 | Potato | nucleus | 34.71 | 30.08 |
| Zm00001d033075_P001 | Maize | nucleus | 25.52 | 29.84 |
| Solyc06g073640.2.1 | Tomato | nucleus | 34.48 | 29.76 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 22.53 | 29.52 |
| KRH18640 | Soybean | nucleus | 36.09 | 29.4 |
| CDY66700 | Canola | nucleus | 29.89 | 29.28 |
| KRG89766 | Soybean | nucleus | 34.48 | 28.79 |
| CDY68663 | Canola | nucleus | 29.66 | 28.23 |
| PGSC0003DMT400058426 | Potato | nucleus | 33.56 | 27.92 |
| Zm00001d014364_P002 | Maize | nucleus | 25.75 | 27.86 |
| CDY19141 | Canola | nucleus | 28.28 | 27.7 |
| CDY15321 | Canola | nucleus | 28.51 | 27.68 |
| Solyc01g009070.2.1 | Tomato | nucleus | 33.79 | 27.37 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 17.7 | 27.21 |
| EER90224 | Sorghum | nucleus | 26.67 | 27.1 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 24.6 | 26.75 |
| CDY19890 | Canola | nucleus | 26.21 | 26.57 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 25.98 | 26.53 |
| CDY20794 | Canola | nucleus | 25.06 | 26.52 |
| CDY48264 | Canola | nucleus | 29.2 | 26.51 |
| CDY67258 | Canola | nucleus | 26.21 | 26.51 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 24.37 | 26.5 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 24.37 | 26.5 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 25.98 | 26.46 |
| CDY12203 | Canola | nucleus | 28.97 | 26.2 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 23.45 | 26.15 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 25.29 | 26.07 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 23.91 | 26.07 |
| CDY64759 | Canola | nucleus | 18.16 | 25.9 |
| CDX67827 | Canola | nucleus | 17.93 | 25.66 |
| PGSC0003DMT400070549 | Potato | nucleus | 28.51 | 25.57 |
| CDX71809 | Canola | nucleus | 15.86 | 25.37 |
| CDY41164 | Canola | nucleus | 15.86 | 25.37 |
| CDY08526 | Canola | nucleus | 29.2 | 25.3 |
| CDY66041 | Canola | nucleus | 27.59 | 24.95 |
| CDY56849 | Canola | nucleus | 28.74 | 24.85 |
| Os06t0679400-01 | Rice | nucleus | 25.52 | 24.83 |
| KXG38121 | Sorghum | nucleus | 25.75 | 24.51 |
| Zm00001d013801_P001 | Maize | nucleus | 25.52 | 24.18 |
| CDY43016 | Canola | nucleus | 29.43 | 23.1 |
| CDY61426 | Canola | nucleus | 29.43 | 22.98 |
| Solyc11g072060.1.1 | Tomato | nucleus | 26.44 | 21.3 |
| Os03t0578900-00 | Rice | nucleus | 25.52 | 21.02 |
| Zm00001d036577_P001 | Maize | nucleus | 24.37 | 20.74 |
Protein Annotations
| EnsemblPlants:CDX83247 | EnsemblPlantsGene:GSBRNA2T00138797001 | Gene3D:1.10.10.60 | GO:A0A078D2A9 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF540 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX83247 | ProteinID:CDX83247.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDF731 | MapMan:15.5.2.1 | : | : |
Description
BnaA03g22590D
Coordinates
chrLK031832:-:627003..628899
Molecular Weight (calculated)
48535.8 Da
IEP (calculated)
4.812
GRAVY (calculated)
-0.782
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKVRHDSGS GDEFAIDKTF HKGPWTSAED QLLIAYVDKH GDGNWNAVQK HSGLSRCGKS CRLRWVNHLR PDLKKGSFTD KEEQRVIELH ASMGNKWARM
101: ATELPGRTDN EIKNFWNTRV KRLQRLGLPI YPDEVREQAM NAAAQNGHNA DSLDGHHSQE SLELDCLEIP DFNFKHLQLN GGSSFLQTLL SSIPTGNQMR
201: QNPSLFQPNI YNVIASPYQQ PPNRKRFREP ETAFPYTGGY ATDEQSAQLW NSPFVETTPG QFNVAPDSHF LGNATTYSSP SEPLILGAEK LELPSFQCFD
301: TQEDPGDWET PQHSNNPMQA IESDNTLVLS SPLTDQTPSE CPSAFCDGLL ESVVYGSSGE KQTTTTDPDS PLLHQSSLLD HIEITPDTAN TAGHNSSAET
401: DLVHFGPTSS DERRTSFESG DWIRQLLGED RDYTK
101: ATELPGRTDN EIKNFWNTRV KRLQRLGLPI YPDEVREQAM NAAAQNGHNA DSLDGHHSQE SLELDCLEIP DFNFKHLQLN GGSSFLQTLL SSIPTGNQMR
201: QNPSLFQPNI YNVIASPYQQ PPNRKRFREP ETAFPYTGGY ATDEQSAQLW NSPFVETTPG QFNVAPDSHF LGNATTYSSP SEPLILGAEK LELPSFQCFD
301: TQEDPGDWET PQHSNNPMQA IESDNTLVLS SPLTDQTPSE CPSAFCDGLL ESVVYGSSGE KQTTTTDPDS PLLHQSSLLD HIEITPDTAN TAGHNSSAET
401: DLVHFGPTSS DERRTSFESG DWIRQLLGED RDYTK
001: MGKVRQDSGS DDDNSIKKSF TKGPWTQAED NLLIAYVDKH GDGNWNAVQN NSGLSRCGKS CRLRWVNHLR PDLKKGAFTE KEEKRVIELH ALLGNKWARM
101: AEELPGRTDN EIKNFWNTRL KRLQRLGLPV YPDEVREHAM NAATHSGLNT DSLDGHHSQE YMEADTVEIP EVDFEHLPLN RSSSYYQSML RHVPPTNVFV
201: RQKPCFFQPP NVYNLIPPSP YMSTGKRPRE PETAFPCPGG YTMNEQSPRL WNYPFVENVS EQLPDSHLLG NAAYSSPPGP LVHGVENFEF PSFQYHEEPG
301: GWGADQPNPM PEHESDNTLV QSPLTAQTPS DCPSSSLYDG LLESVVYGSS GEKPATDTDS ESSLFQSFTP ANENITGKTC FLTLYALHAL HCLCNQFKKS
401: PLLHLHDKLN WCNKFRFNSF KSGTHIL
101: AEELPGRTDN EIKNFWNTRL KRLQRLGLPV YPDEVREHAM NAATHSGLNT DSLDGHHSQE YMEADTVEIP EVDFEHLPLN RSSSYYQSML RHVPPTNVFV
201: RQKPCFFQPP NVYNLIPPSP YMSTGKRPRE PETAFPCPGG YTMNEQSPRL WNYPFVENVS EQLPDSHLLG NAAYSSPPGP LVHGVENFEF PSFQYHEEPG
301: GWGADQPNPM PEHESDNTLV QSPLTAQTPS DCPSSSLYDG LLESVVYGSS GEKPATDTDS ESSLFQSFTP ANENITGKTC FLTLYALHAL HCLCNQFKKS
401: PLLHLHDKLN WCNKFRFNSF KSGTHIL
Arabidopsis Description
AtMYB81Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.