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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38535 Canola nucleus 63.0 62.27
CDX83247 Canola nucleus 61.36 60.23
Bra000531.1-P Field mustard nucleus 61.12 60.0
CDX71481 Canola nucleus 58.08 43.51
AT2G26950.1 Thale cress cytosol 32.08 35.86
VIT_06s0009g02480.t01 Wine grape nucleus 37.0 30.15
Zm00001d033075_P001 Maize nucleus 25.29 29.03
KRH18640 Soybean nucleus 36.07 28.84
HORVU7Hr1G105450.1 Barley nucleus 22.25 28.61
KRG89766 Soybean nucleus 34.66 28.41
PGSC0003DMT400015156 Potato nucleus 32.55 27.69
Solyc06g073640.2.1 Tomato nucleus 32.55 27.58
TraesCS4A01G467100.1 Wheat nucleus 18.03 27.21
PGSC0003DMT400058426 Potato nucleus 31.85 26.0
TraesCS6D01G126900.1 Wheat nucleus 24.12 25.81
Solyc01g009070.2.1 Tomato nucleus 32.32 25.7
AT4G26930.1 Thale cress nucleus 22.95 25.19
HORVU6Hr1G026450.1 Barley nucleus 23.42 25.0
TraesCS7D01G446700.1 Wheat nucleus 23.42 25.0
TraesCS7B01G357900.1 Wheat nucleus 23.18 24.75
TraesCS7D01G130100.1 Wheat nucleus 24.59 24.65
TraesCS7B01G031000.1 Wheat nucleus 24.36 24.64
HORVU7Hr1G105520.2 Barley nucleus 22.48 24.62
EER90224 Sorghum nucleus 24.59 24.53
AT5G06100.4 Thale cress nucleus 29.74 24.42
HORVU7Hr1G027370.1 Barley nucleus 24.36 24.36
AT3G60460.1 Thale cress nucleus 17.1 24.33
PGSC0003DMT400070549 Potato nucleus 27.63 24.33
Zm00001d014364_P002 Maize nucleus 22.72 24.13
AT2G32460.1 Thale cress nucleus 27.63 24.08
KXG38121 Sorghum nucleus 25.53 23.85
Os06t0679400-01 Rice nucleus 24.82 23.71
AT5G55020.1 Thale cress nucleus 29.04 23.71
Zm00001d013801_P001 Maize nucleus 25.06 23.31
AT3G11440.1 Thale cress nucleus 28.81 22.24
Solyc11g072060.1.1 Tomato nucleus 25.76 20.37
Os03t0578900-00 Rice nucleus 24.59 19.89
Zm00001d036577_P001 Maize nucleus 22.48 18.79
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1EntrezGene:817237ProteinID:AAF18615.1ProteinID:AEC07911.1ArrayExpress:AT2G26960
EnsemblPlantsGene:AT2G26960RefSeq:AT2G26960TAIR:AT2G26960RefSeq:AT2G26960-TAIR-GEnsemblPlants:AT2G26960.1TAIR:AT2G26960.1
Unigene:At.28682Symbol:AtMYB81EMBL:DQ446571GO:GO:0000981GO:GO:0001135GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006357GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0030154GO:GO:0043565GO:GO:0044212InterPro:Homeobox-like_sf
InterPro:IPR017930InterPro:Myb_domRefSeq:NP_180264.1PFAM:PF00249PFscan:PS51294PANTHER:PTHR10641
PANTHER:PTHR10641:SF540UniProt:Q9SLH1InterPro:SANT/MybSMART:SM00717SUPFAM:SSF46689UniParc:UPI00000AA0FD
Description
AtMYB81Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1]
Coordinates
chr2:-:11506065..11507426
Molecular Weight (calculated)
48222.3 Da
IEP (calculated)
6.323
GRAVY (calculated)
-0.723
Length
427 amino acids
Sequence
(BLAST)
001: MGKVRQDSGS DDDNSIKKSF TKGPWTQAED NLLIAYVDKH GDGNWNAVQN NSGLSRCGKS CRLRWVNHLR PDLKKGAFTE KEEKRVIELH ALLGNKWARM
101: AEELPGRTDN EIKNFWNTRL KRLQRLGLPV YPDEVREHAM NAATHSGLNT DSLDGHHSQE YMEADTVEIP EVDFEHLPLN RSSSYYQSML RHVPPTNVFV
201: RQKPCFFQPP NVYNLIPPSP YMSTGKRPRE PETAFPCPGG YTMNEQSPRL WNYPFVENVS EQLPDSHLLG NAAYSSPPGP LVHGVENFEF PSFQYHEEPG
301: GWGADQPNPM PEHESDNTLV QSPLTAQTPS DCPSSSLYDG LLESVVYGSS GEKPATDTDS ESSLFQSFTP ANENITGKTC FLTLYALHAL HCLCNQFKKS
401: PLLHLHDKLN WCNKFRFNSF KSGTHIL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.