Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY38535 | Canola | nucleus | 63.0 | 62.27 |
CDX83247 | Canola | nucleus | 61.36 | 60.23 |
Bra000531.1-P | Field mustard | nucleus | 61.12 | 60.0 |
CDX71481 | Canola | nucleus | 58.08 | 43.51 |
AT2G26950.1 | Thale cress | cytosol | 32.08 | 35.86 |
VIT_06s0009g02480.t01 | Wine grape | nucleus | 37.0 | 30.15 |
Zm00001d033075_P001 | Maize | nucleus | 25.29 | 29.03 |
KRH18640 | Soybean | nucleus | 36.07 | 28.84 |
HORVU7Hr1G105450.1 | Barley | nucleus | 22.25 | 28.61 |
KRG89766 | Soybean | nucleus | 34.66 | 28.41 |
PGSC0003DMT400015156 | Potato | nucleus | 32.55 | 27.69 |
Solyc06g073640.2.1 | Tomato | nucleus | 32.55 | 27.58 |
TraesCS4A01G467100.1 | Wheat | nucleus | 18.03 | 27.21 |
PGSC0003DMT400058426 | Potato | nucleus | 31.85 | 26.0 |
TraesCS6D01G126900.1 | Wheat | nucleus | 24.12 | 25.81 |
Solyc01g009070.2.1 | Tomato | nucleus | 32.32 | 25.7 |
AT4G26930.1 | Thale cress | nucleus | 22.95 | 25.19 |
HORVU6Hr1G026450.1 | Barley | nucleus | 23.42 | 25.0 |
TraesCS7D01G446700.1 | Wheat | nucleus | 23.42 | 25.0 |
TraesCS7B01G357900.1 | Wheat | nucleus | 23.18 | 24.75 |
TraesCS7D01G130100.1 | Wheat | nucleus | 24.59 | 24.65 |
TraesCS7B01G031000.1 | Wheat | nucleus | 24.36 | 24.64 |
HORVU7Hr1G105520.2 | Barley | nucleus | 22.48 | 24.62 |
EER90224 | Sorghum | nucleus | 24.59 | 24.53 |
AT5G06100.4 | Thale cress | nucleus | 29.74 | 24.42 |
HORVU7Hr1G027370.1 | Barley | nucleus | 24.36 | 24.36 |
AT3G60460.1 | Thale cress | nucleus | 17.1 | 24.33 |
PGSC0003DMT400070549 | Potato | nucleus | 27.63 | 24.33 |
Zm00001d014364_P002 | Maize | nucleus | 22.72 | 24.13 |
AT2G32460.1 | Thale cress | nucleus | 27.63 | 24.08 |
KXG38121 | Sorghum | nucleus | 25.53 | 23.85 |
Os06t0679400-01 | Rice | nucleus | 24.82 | 23.71 |
AT5G55020.1 | Thale cress | nucleus | 29.04 | 23.71 |
Zm00001d013801_P001 | Maize | nucleus | 25.06 | 23.31 |
AT3G11440.1 | Thale cress | nucleus | 28.81 | 22.24 |
Solyc11g072060.1.1 | Tomato | nucleus | 25.76 | 20.37 |
Os03t0578900-00 | Rice | nucleus | 24.59 | 19.89 |
Zm00001d036577_P001 | Maize | nucleus | 22.48 | 18.79 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:817237 | ProteinID:AAF18615.1 | ProteinID:AEC07911.1 | ArrayExpress:AT2G26960 |
EnsemblPlantsGene:AT2G26960 | RefSeq:AT2G26960 | TAIR:AT2G26960 | RefSeq:AT2G26960-TAIR-G | EnsemblPlants:AT2G26960.1 | TAIR:AT2G26960.1 |
Unigene:At.28682 | Symbol:AtMYB81 | EMBL:DQ446571 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf |
InterPro:IPR017930 | InterPro:Myb_dom | RefSeq:NP_180264.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
PANTHER:PTHR10641:SF540 | UniProt:Q9SLH1 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000AA0FD |
Description
AtMYB81Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1]
Coordinates
chr2:-:11506065..11507426
Molecular Weight (calculated)
48222.3 Da
IEP (calculated)
6.323
GRAVY (calculated)
-0.723
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKVRQDSGS DDDNSIKKSF TKGPWTQAED NLLIAYVDKH GDGNWNAVQN NSGLSRCGKS CRLRWVNHLR PDLKKGAFTE KEEKRVIELH ALLGNKWARM
101: AEELPGRTDN EIKNFWNTRL KRLQRLGLPV YPDEVREHAM NAATHSGLNT DSLDGHHSQE YMEADTVEIP EVDFEHLPLN RSSSYYQSML RHVPPTNVFV
201: RQKPCFFQPP NVYNLIPPSP YMSTGKRPRE PETAFPCPGG YTMNEQSPRL WNYPFVENVS EQLPDSHLLG NAAYSSPPGP LVHGVENFEF PSFQYHEEPG
301: GWGADQPNPM PEHESDNTLV QSPLTAQTPS DCPSSSLYDG LLESVVYGSS GEKPATDTDS ESSLFQSFTP ANENITGKTC FLTLYALHAL HCLCNQFKKS
401: PLLHLHDKLN WCNKFRFNSF KSGTHIL
101: AEELPGRTDN EIKNFWNTRL KRLQRLGLPV YPDEVREHAM NAATHSGLNT DSLDGHHSQE YMEADTVEIP EVDFEHLPLN RSSSYYQSML RHVPPTNVFV
201: RQKPCFFQPP NVYNLIPPSP YMSTGKRPRE PETAFPCPGG YTMNEQSPRL WNYPFVENVS EQLPDSHLLG NAAYSSPPGP LVHGVENFEF PSFQYHEEPG
301: GWGADQPNPM PEHESDNTLV QSPLTAQTPS DCPSSSLYDG LLESVVYGSS GEKPATDTDS ESSLFQSFTP ANENITGKTC FLTLYALHAL HCLCNQFKKS
401: PLLHLHDKLN WCNKFRFNSF KSGTHIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.