Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72198 | Canola | nucleus | 42.2 | 100.0 |
| CDY69320 | Canola | nucleus | 41.58 | 98.52 |
| Bra002042.1-P | Field mustard | nucleus | 94.8 | 97.02 |
| CDY08526 | Canola | nucleus | 70.69 | 67.73 |
| CDY56849 | Canola | nucleus | 70.69 | 67.59 |
| AT3G11440.1 | Thale cress | nucleus | 76.3 | 66.37 |
| GSMUA_Achr7P21550_001 | Banana | nucleus | 14.35 | 52.27 |
| GSMUA_Achr10P... | Banana | nucleus | 31.18 | 38.86 |
| KRH20589 | Soybean | nucleus | 39.71 | 35.83 |
| KRH13249 | Soybean | nucleus | 39.5 | 35.65 |
| VIT_13s0067g01630.t01 | Wine grape | nucleus | 41.16 | 35.42 |
| KRH56248 | Soybean | nucleus | 35.14 | 32.88 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 22.66 | 32.83 |
| KRH62709 | Soybean | nucleus | 34.1 | 32.16 |
| GSMUA_Achr1P17150_001 | Banana | nucleus | 38.46 | 31.57 |
| Zm00001d033075_P001 | Maize | nucleus | 24.32 | 31.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.8 | 30.94 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 17.46 | 29.68 |
| CDY66700 | Canola | nucleus | 27.23 | 29.5 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 23.91 | 29.49 |
| CDY68663 | Canola | nucleus | 27.86 | 29.32 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 23.91 | 28.75 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 23.91 | 28.75 |
| CDY15321 | Canola | nucleus | 26.61 | 28.57 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 23.7 | 28.5 |
| CDY19141 | Canola | nucleus | 26.2 | 28.38 |
| Zm00001d014364_P002 | Maize | nucleus | 23.7 | 28.36 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 24.95 | 28.1 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 24.53 | 27.96 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 24.74 | 27.93 |
| CDY67258 | Canola | nucleus | 24.95 | 27.91 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 23.08 | 27.82 |
| EER90224 | Sorghum | nucleus | 24.74 | 27.8 |
| CDY19890 | Canola | nucleus | 24.74 | 27.74 |
| CDX83247 | Canola | nucleus | 24.95 | 27.59 |
| CDY38535 | Canola | nucleus | 24.74 | 27.55 |
| KXG38121 | Sorghum | nucleus | 25.78 | 27.13 |
| CDY20794 | Canola | nucleus | 23.08 | 27.01 |
| Zm00001d013801_P001 | Maize | nucleus | 25.36 | 26.58 |
| CDY48264 | Canola | nucleus | 26.4 | 26.51 |
| CDY12203 | Canola | nucleus | 26.4 | 26.4 |
| CDX71809 | Canola | nucleus | 14.55 | 25.74 |
| GSMUA_Achr7P02510_001 | Banana | nucleus | 29.94 | 25.67 |
| CDY41164 | Canola | nucleus | 14.35 | 25.37 |
| CDX67827 | Canola | nucleus | 15.8 | 25.0 |
| CDY64759 | Canola | nucleus | 15.8 | 24.92 |
| Os06t0679400-01 | Rice | nucleus | 22.87 | 24.61 |
| CDY43016 | Canola | nucleus | 26.2 | 22.74 |
| Os03t0578900-00 | Rice | nucleus | 24.74 | 22.54 |
| GSMUA_Achr7P21560_001 | Banana | nucleus | 20.37 | 22.48 |
| CDY61426 | Canola | nucleus | 25.99 | 22.44 |
| CDX71481 | Canola | nucleus | 25.78 | 21.75 |
| Zm00001d036577_P001 | Maize | nucleus | 22.87 | 21.53 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078JJQ5 | UniProt:A0A078JJQ5 | EnsemblPlants:CDY66041 | ProteinID:CDY66041 |
| ProteinID:CDY66041.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00051216001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF938 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEA671 | SEG:seg |
Description
BnaCnng49390DBnaCnng49390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJQ5]
Coordinates
chrLK035054:-:10144..11759
Molecular Weight (calculated)
53525.6 Da
IEP (calculated)
6.026
GRAVY (calculated)
-0.557
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYTMVTDES DDAMYSSIYN ESPSAADNIG SGCTSRGKGS VLKKGPWTST EDGILIDYVK RHGEGNWNTV QKHTSLARCG KSCRLRWANH LRPNLKKGAF
101: SKEEEQLIVE MHARMGNKWA QMAEHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPGTHVE DLHWSQQYHP STSNVTDRRR HQDILQLGNS KANVLFDDLT
201: FANVLFEDLN FATSLLPVAS DISDMFSCNM LGTGASSYMS PILPSHSNIR QAFQSPEHFQ NAAPQKNPRS CSISDHPMYG NQHRTDVMIQ DSHHTFTDGM
301: VPTSKPLFGA VKLELPSFQY SEASGFDQWT TPSTPQSDLL DSVDTYIQSP PPLEIDEPDC FSSCDTGLLD MLLHEAKIKA SAKHSFSSTT CITNGTQNVP
401: RGGETHIVTS GAGEIKSSSL IFEAFAVVKT EEMDEVWEPK RADVIRPDVL LESSWQDQQS RFGIVRDSSS LSDALSLLLG G
101: SKEEEQLIVE MHARMGNKWA QMAEHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPGTHVE DLHWSQQYHP STSNVTDRRR HQDILQLGNS KANVLFDDLT
201: FANVLFEDLN FATSLLPVAS DISDMFSCNM LGTGASSYMS PILPSHSNIR QAFQSPEHFQ NAAPQKNPRS CSISDHPMYG NQHRTDVMIQ DSHHTFTDGM
301: VPTSKPLFGA VKLELPSFQY SEASGFDQWT TPSTPQSDLL DSVDTYIQSP PPLEIDEPDC FSSCDTGLLD MLLHEAKIKA SAKHSFSSTT CITNGTQNVP
401: RGGETHIVTS GAGEIKSSSL IFEAFAVVKT EEMDEVWEPK RADVIRPDVL LESSWQDQQS RFGIVRDSSS LSDALSLLLG G
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.